KEGG   Methanosarcina sp. Kolksee: MSKOL_0504
Entry
MSKOL_0504        CDS       T03821                                 
Name
(GenBank) Geranylfarnesyl diphosphate synthase
  KO
K13787  geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
mek  Methanosarcina sp. Kolksee
Pathway
mek00900  Terpenoid backbone biosynthesis
mek01100  Metabolic pathways
mek01110  Biosynthesis of secondary metabolites
Module
mek_M00365  C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:mek00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    MSKOL_0504
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:mek01006]
    MSKOL_0504
Enzymes [BR:mek01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     MSKOL_0504
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     MSKOL_0504
    2.5.1.29  geranylgeranyl diphosphate synthase
     MSKOL_0504
Prenyltransferases [BR:mek01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   MSKOL_0504
SSDB
Motif
Pfam: polyprenyl_synt FA_synthesis
Other DBs
NCBI-ProteinID: AKB46281
UniProt: A0A0E3LIM5
Position
complement(610616..611581)
AA seq 321 aa
MTLVDEIKKRSVHVDAAIDELLPVAHPEELYKASRYLVDSGGKRLRPAVLILAAEATGSD
LKSVLPAAVAVELVHNFTLIHDDIMDKDDIRRGRPAVHMIWGEAGAILAGDTLYSKAFSI
LSKVQNEPSRILICMDVLSKTCTEICEGQWLDMDFEEREKVSKAEYIEMVEKKTSVLYAA
AAKIGALLGGASDEIAEALSEYGRLIGIGFQMYDDVLDMVTPEEVLGKVRGSDLMEGKHT
LIVIDAFEKGVKLDIFGKGEATQEETDEAVRILTECGSIDYVKDLAISYINEGKAKLDAL
RDCPEKELLLQIADYMISRNY
NT seq 966 nt   +upstreamnt  +downstreamnt
atgacgttagttgatgagatcaaaaaaagaagtgtccatgttgacgccgcaattgatgaa
ctgcttccggtagcccatccagaggagctatataaagcctcccgctacctggtagattca
ggaggaaagcgcctccgccccgcagttcttattctggcagctgaagctacaggctctgac
ctcaagtctgtcttacctgcagcggtggccgtggaacttgtacataatttcactctgatc
catgatgacataatggataaggatgatattcgcagagggagacctgcagtccatatgata
tggggtgaagctggagcaattcttgcaggtgatacactttattccaaagccttttcgatt
ctgtcaaaagttcaaaatgagccttcaagaattttaatatgtatggacgttctttcaaaa
acatgtaccgaaatctgtgaaggccagtggcttgacatggatttcgaagagagggaaaag
gttagtaaagctgaatatattgagatggtggaaaaaaagacctcagttctttatgcagct
gcagccaagatcggggctcttcttggaggagcttctgatgagattgctgaagccttatcc
gagtatgggcgccttatagggatcgggttccagatgtatgacgatgttctggatatggtc
accccggaagaagtgctcggtaaggtaagaggcagcgaccttatggaagggaaacatacc
cttattgtaatcgacgctttcgaaaaaggtgtgaaactggacattttcggaaaaggggaa
gctactcaggaagaaactgacgaagccgtccggattttaaccgaatgcggatcaattgat
tatgtaaaggaccttgcaatttcatatatcaacgaaggcaaagcaaaactggacgctctg
cgggactgcccggaaaaggaacttctccttcagattgctgattatatgatctcaaggaac
tactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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