KEGG   Methanosarcina sp. WWM596: MSWHS_1228
Entry
MSWHS_1228        CDS       T03852                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
meq  Methanosarcina sp. WWM596
Brite
KEGG Orthology (KO) [BR:meq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meq03032]
    MSWHS_1228
   03400 DNA repair and recombination proteins [BR:meq03400]
    MSWHS_1228
Enzymes [BR:meq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MSWHS_1228
DNA replication proteins [BR:meq03032]
 Prokaryotic type
  DNA Topoisomerases
   MSWHS_1228
DNA repair and recombination proteins [BR:meq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MSWHS_1228
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim OEP Auto_anti-p27 Toprim_2
Other DBs
NCBI-ProteinID: AKB18091
UniProt: A0A0E3L2I7
Position
complement(1478247..1480709)
AA seq 820 aa
MRINNPCKKETTNSVRKKPKDLSAFHFLSVSQEFRFFIMTVVTFAEKNKAAAQIARILGD
GEVDKISVEGLPAYEFKWKGEEWFVMGLSGHIMSYDFPEKYNKWNEVDPGVLLGVYPEKF
VTRAEYAAAVKNLAKRADKIILACDYDREGENIGFEAKTLSEEVTNVPVSRARFSALSPK
EVKKAFENPVDPDYNMAMAAEARQILDLKMGAAFTRFVTLSVREKARTKDILSIGPCQTP
TCGFVYEREKTIRAFETKDFWKITAIFVAKGGEFEGIHRAGNIHDKEKASEIFKRLKGAK
EGLVVKKTVKETKTSPPNPLNTTEYLKRASKFLGISPEAALEVAEQLYLAGFTSYPRTET
NKYADDFDFKSLVFDFARQNEYKPFAESILSAPIVPKNGEKDAHDHPPIHPIRAAARREI
NAAVNIPQAAEVYDLIARHFLANLMPAAVFEKTHLHLQVQEEPFDSSGTVLKDAGWLEVY
PFENKKDKLLPFVEEKEKVGIKKLRNTKSKTSPPKKLTEAELLTLMDKHGIGTKATAPSH
IETNKKRGYFETKGKTVSILDTGFTLMEGLSLTVPILVRPDIRSKIEALIQEVEDGKKEF
EAALAEGTALIREMYAQLEANKKELTSSIAGTIKDEAALEDKKNYIGTCKACGHVLKIVQ
TDTGRFVGCTGYPDCRNSFPLPKTGALNVLRSKECKKGGAAVLKVGNKYNWAVGIGPCFK
CELEKECYPPETVGPCPQCDGSMFLISFKDNRFLGCTKRCGYTHSVPKTGKLTLLDKTCG
TCGWKLFRLKEEGESPEEDFCVNRRCTEGIKYWKKNRPQK
NT seq 2463 nt   +upstreamnt  +downstreamnt
gtgcgtataaataatccctgtaagaaagaaacaacaaactctgtaagaaagaaacccaaa
gatctttccgcatttcatttcttatccgtatcacaggagttcaggtttttcatcatgaca
gttgtcacatttgcagaaaagaataaggcagcggcccagattgccagaattctgggcgat
ggggaagtagataaaatctcagtagaagggctgccagcttacgagtttaagtggaaagga
gaagagtggttcgtgatggggttatccgggcacattatgagctatgattttcctgaaaaa
tataacaaatggaatgaggttgatcccggtgtcctccttggagtttaccctgaaaagttc
gtaacaagggcagagtatgcagctgcagtgaaaaacctggcaaaaagggcagacaaaatt
atccttgcatgcgactatgacagggaaggagaaaacataggttttgaggccaagactctt
tcagaggaggttacaaacgtaccggtctcaagggcacgtttttcagccctttccccaaaa
gaagtcaaaaaagcttttgaaaaccctgtagaccctgactacaacatggcaatggctgcg
gaagccagacagatccttgacctgaagatgggggcagcttttacccgttttgtcacgctt
tcggtcagggaaaaagcaaggacaaaagacatcctttcaatagggccctgccagacgccc
acctgcggttttgtgtatgagcgggaaaagaccatccgggcttttgagacaaaggacttc
tggaagattactgcaatttttgttgcaaagggcggggaatttgagggtatccacagggca
ggaaacatccacgacaaagaaaaagcatctgagatcttcaaaaggttaaaaggggcaaaa
gaaggtcttgtcgtaaagaaaacggtaaaggaaacaaagaccagccctccaaacccgctt
aacaccacagagtatctgaagcgggcttcaaaattcctgggaatcagtccggaagctgcc
cttgaagttgcagaacagctctaccttgcagggtttacaagctacccgaggacagagaca
aacaaatacgcagatgattttgattttaagtctctggtctttgattttgcaaggcagaac
gagtataagccctttgccgagtcaatcctctctgccccgatagtgccaaaaaacggggaa
aaagacgcacacgaccacccccctatccaccccatccgagcagctgcaaggagagaaatc
aatgctgcagtaaatatcccgcaggcggcagaggtctatgaccttattgcaaggcatttc
ttggcaaacctgatgcctgcagctgtttttgaaaaaactcaccttcacctgcaggttcag
gaagaacctttcgactcctcagggaccgtgcttaaagatgcaggctggctcgaagtttat
ccttttgaaaataaaaaagataaactcctcccgtttgtagaggaaaaagagaaagtgggc
ataaaaaagctgagaaacaccaagtccaaaaccagccctcccaagaagcttacagaagcc
gaacttcttacccttatggacaagcacgggataggaacaaaagcaacagctccatcccat
atagaaacaaacaagaagcgagggtattttgagaccaaggggaagacagtctcgatcctt
gacacaggctttaccctgatggaagggctctccctgactgtgccaatcctcgtcaggccg
gacattcgctcaaagatcgaagcccttattcaggaagtagaagatgggaaaaaagagttt
gaagctgcccttgccgagggcacggctcttatccgggaaatgtatgcccagcttgaagca
aacaaaaaggagctgacttcaagcattgcaggtacgatcaaggacgaagctgcccttgaa
gacaagaaaaactatattgggacctgcaaggcttgtgggcatgtgctcaagattgtgcag
acggatacggggcgttttgtaggctgtacaggctatcctgactgcagaaactcgttccct
cttccgaaaacgggagccctgaatgtgctcaggagcaaagaatgcaaaaagggaggagcg
gccgtcctgaaggtaggcaacaaatacaactgggcggtcggcattggcccctgcttcaaa
tgcgagcttgaaaaggaatgctaccctcccgaaaccgtaggtccctgcccacaatgtgac
gggagcatgttcctgatctcttttaaagacaaccgtttcctgggctgcacaaagcgctgc
ggatacacgcattcagtcccgaaaaccggaaaactgaccctgcttgataaaacctgtggg
acatgcggctggaagctgttcaggttaaaagaagagggtgaaagcccggaagaggatttc
tgcgtaaaccggcgctgcacggaaggcataaaatactggaaaaaaaacaggccacaaaag
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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