KEGG T00374: Meso

Mesorhizobium sp. BNC1: Meso_3622

Entry

Meso_3622 CDS T00374

Definition

fumarate lyase

Orthology

K01857

3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]

Organism

mes Mesorhizobium sp. BNC1

Pathway

mes00362	Benzoate degradation
mes01100	Metabolic pathways
mes01120	Microbial metabolism in diverse environments

Class

Metabolism; Xenobiotics biodegradation and metabolism; Benzoate degradation [PATH:mes00362]

SSDB

Motif

Pfam:

Lyase_1 ADSL_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Structure

PDB:

3C8T

Position

complement(3908436..3909806)

AA seq 456 aa
MRISMATFFPQSVTALDSPLYGRSFADDKMRELFSAQSFISRCVETEVALARAQARLGII
PEDAAAGITAAARTFAPEMERLRDDTEIVGYPILPLVEQLSAHAGEAGKYLHWGATTQDI
MDTATVLQIRDGLALISRRIESVRKALAALARNHRDTPMAGRTHLQHALPVTFGYKAAVW
LSAFDRHAARLEEISPRVLVVEFSGASGTLASLGTRGLDVQRELARELNLGVPSITWHSA
RDAVAETVQFLALVSGSLGKLAMDISIMMTTELGEVAEPFVRHRGASSTMPQKQNPVSCE
LILAGARIVRNHATSMLDAMIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFMLGGLQ
VFPDRMRENLDHSRGLIVAEAVMMALAPHTGRKEAHDIVYLGCRRAVEDKTGLFEVLRTM
PEVAKPLGEEALRDLTDPRNYLGSAGAMVDNVLGGR

NT seq 1371 nt +upstreamnt +downstreamnt
atgagaatatcgatggcgaccttctttcctcaatcagtgacggcactcgactccccgctt
tacgggcgtagcttcgccgatgacaaaatgcgcgagctcttttccgcgcaaagcttcatt
tctcgctgtgtagaaacggaggtcgccctcgccagggcgcaggcgcgcctcggcattatt
cccgaagacgcagcggcgggcatcaccgccgctgccagaaccttcgcgcctgagatggaa
cgcctgcgcgacgataccgagatcgtcggctatccaatcctgccgctggtcgaacagcta
tccgcccatgcgggcgaagccggaaaataccttcactggggcgcgactacgcaggacatc
atggacaccgccaccgtcctgcaaattcgggatgggttagctctcattagccggcgcatc
gaaagcgtgcgcaaggcattggcggcgctggcgcgtaatcatcgcgacacgccgatggcc
ggccgcacacatcttcaacacgcattgccggtcacttttggctacaaggcagccgtgtgg
ctttccgccttcgacaggcatgccgcgcgccttgaggaaatcagcccccgcgtgctggtg
gtcgaattctccggtgcgtccggaacgctcgcctcgctcggaacgcgcgggctggacgtc
cagcgcgaactggcgcgcgagctcaatctcggcgttccttcgatcacctggcattccgcg
cgcgacgcggtcgcggaaaccgttcagttcctggctctcgtttccggcagcctcggcaag
ctcgcgatggacatttctatcatgatgacgacggaactcggtgaggtcgccgagcccttt
gtgcgtcatcgcggcgccagcagcaccatgccgcaaaaacagaaccccgtttcctgcgag
ctcatcctcgccggtgcgcggatcgtgcgcaatcacgccacgtcgatgctcgacgcgatg
atccacgacttcgagcgcgcgaccgggccgtggcacctggaatggtccgccgtccccgaa
ggctttgcagtcgcatcggggatactctatcaggccgaattcatgctgggcggcctccag
gtcttcccggatcggatgcgcgaaaatcttgatcattcacgcgggctgatcgtggcggaa
gccgtcatgatggcgcttgcgccccataccgggcgtaaggaagcgcacgatatcgtctat
ctcggctgccgccgtgcggtggaggacaagaccggtcttttcgaggtgctgcgcaccatg
ccggaagtggccaagccgctcggcgaagaggcgctcagggatctgactgatccccgcaac
tatctcggcagcgccggcgctatggtcgacaatgtgctcggcggccgatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MES (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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