KEGG   Chelativorans sp. BNC1: Meso_4100Help
Entry
Meso_4100         CDS       T00374                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mes  Chelativorans sp. BNC1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mes00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Meso_4100
Enzymes [BR:mes01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Meso_4100
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Meso_4100
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
4409575..4410468
Genome map
AA seq 297 aa AA seqDB search
MPELPEVETVRRGLEPVMEGARIIHVEQRRADLRFPFPAGFSEHVKGCRIEALGRRAKYL
LLHLENGRVLVSHLGMSGSFRIEESGSDKLRGDFHYARSKAEKHDHVVFHLARHEGGSAR
VIYNDPRRFGFMLLLDSADLEAHPLFAGLGVEPTGNALDGALLARLLAGKRAPLKAALMD
QRLVAGLGNIYVCEALWRAGLSPRRIAATIATREGKSTGRSERLAGAIRTVIAEAIAAGG
SSLKDYVQADGSLGYFQHSFSVYDREGKPCRKEGCSGTIQRFVQGGRSTFYCPICQR
NT seq 894 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagcttccagaggtcgaaacagtccggcgtggcctggagcctgtgatggaaggc
gcgcggataatccacgtcgagcagcgccgcgccgatctgcgctttccctttcccgccggc
ttttccgaacacgtgaaaggatgcaggatcgaggctctcgggcgccgcgcaaaatatctg
cttctccacctggaaaacggcagggtgctcgtaagccatttgggcatgtccggctctttt
cgcatcgaggagagcgggtcggacaagcttcgcggtgacttccattacgcgcgttcaaag
gccgagaagcacgaccatgtcgtcttccacctggcgcggcacgaaggcggctcggcccgc
gtcatctacaatgatccgcggcgcttcggcttcatgcttctcctggacagcgcggatctg
gaagcgcacccgctttttgccgggctcggcgtcgaacccaccggcaatgcgcttgacggc
gcgcttctggcccggctgcttgccggaaagcgtgccccgctcaaggctgcgctcatggac
cagcggttggtggctggccttggcaacatctatgtatgcgaggcgctttggcgcgcgggt
ctttcaccgcgccgtatcgccgctacgatcgcgacacgcgagggcaaatcgacgggacgc
agcgagcgtttggctggggcgatccgcacggttattgccgaggccatcgcggcgggaggc
tcatccctcaaggattatgtccaggcagacggctcgctcggctattttcaacatagcttc
agcgtctatgatcgcgaggggaagccctgccgcaaggaaggttgttcaggcacgatccag
cggttcgtgcagggaggccgctctacattctattgccctatatgtcagcgctag

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