KEGG   Mesorhizobium sp. WSM1497: A9K65_017855
Entry
A9K65_017855      CDS       T04915                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mesw  Mesorhizobium sp. WSM1497
Pathway
mesw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mesw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A9K65_017855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesw03019]
    A9K65_017855
Messenger RNA biogenesis [BR:mesw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A9K65_017855
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: ARP65034
Position
3678926..3680596
AA seq 556 aa
MAKAENAELVFVPLGGVGEIGMNFALYGYGPPSAREWIVIDVGVTFPDASLPGVDLVLPD
TRFIEENLANLRGIIITHAHEDHYGALLDTWPKLKAPVWMTPFSAGLLEAKRQGEQGAPK
IPVTIYRAGEKFTVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPEPTIGPK
TDEARFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQAAKGRVAVTTFSSNV
GRIVSIAKAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDFGFIPRENLVII
CTGSQGEPLAALAKLSREEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGVKII
EDGDALVHVSGHPRRSELRKMYEWVRPQIGVPVHGEAAHLVAQGSLMSTSGIGQVAQVRD
GDMLRLAPGPATIMDQVPFGRIYKDGRLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYE
LAGDPDLVAIGVAEADGRGESLEDLMIDAAIGAVDSIPRQRRKDLDLVQEAVRRAVRGAA
NEAWGKKPLVTVFVTR
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgaaagcggaaaacgccgaactcgtcttcgtgccgctcggcggcgtcggcgagatc
ggcatgaacttcgctctttacggctacgggccgcccagcgcgcgcgaatggatcgtcatc
gatgtcggagtgaccttccccgatgccagcctgccgggcgtcgacctagtgctgcccgac
acacgcttcatcgaggagaacctcgccaatctgcgcggcatcatcatcacgcatgcgcat
gaagaccattacggcgcgctgctcgacacatggccgaagctgaaggcgccggtctggatg
acgccgttcagcgccggcctgctggaagccaagcggcaaggcgagcagggcgcaccgaaa
ataccggtcacgatctaccgggcgggcgagaaattcaccgtcggccccttcgagatcgaa
gccattccggtcgcgcactcgattcccgagccgatgtcgctggcgatcacctcgccggca
ggcaccgtcatccataccggtgactggaagatcgatccggagccgacgatcgggccgaag
accgacgaggcgcgtttccgcgcctatggcgacaagggcgttctggcgctgatctgcgat
tcgaccaatgcgctgcgcgaaggcgagtcgccttcggaagtggctgtgggcgagggcctc
aagggcgtcatccaggctgccaaaggccgtgtcgccgtcaccacgttctcctccaatgtc
ggacgcatcgtctcgatcgccaaagcggcccgcgatgccggacgccagtgcctggtgctt
ggccgttcgctgaagcgggtcatcgatgtggccggagaactcggctacatggacggtctg
ccggagttcatcgccgaggaggattttggtttcatcccgcgcgaaaacctggtcatcatc
tgcaccggcagccagggcgagccgctggccgcactggccaagctgtcgcgcgaagagatg
aagtcggtgtcgctgacggcaggcgacacagtggtgttttcttcgcgtacgattcccggc
aacgagaaggcgatcctcgagatcaagaaccgtctcatcgacctcggcgtcaagatcatc
gaggacggcgatgcgctggtgcatgtctccggccatccgcggcgcagcgaattgcgcaag
atgtatgaatgggtgcgcccgcagatcggcgttcccgtgcatggcgaggcggcacatctg
gtggcgcagggctcgctgatgtcgacatcgggcatcggccaggtggcgcaggtgcgcgac
ggcgacatgctcaggcttgctcccggcccagccaccatcatggatcaggtgccgttcggc
cgtatctacaaggatggcagactgatcggcaccgatcaggcgatgggcatccgcgaccgg
cgcaaattgtcctttgccggccacgtggcggtcaatgtcgtgttggacgacaaatatgag
cttgccggcgaccccgatttggtcgccatcggcgtcgccgaggccgatggccgtggcgag
tcgctggaagatctgatgatcgatgcggcaatcggcgcggtggactcgatcccccgtcag
cgccgaaaagacctcgacctggtgcaggaagcagtgcggcgcgccgtgcgcggcgccgcc
aacgaagcctggggcaagaagccgctggtgacggtgttcgtcactcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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