KEGG   Methylobacterium sp. 4-46: M446_6254Help
Entry
M446_6254         CDS       T00679                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
met  Methylobacterium sp. 4-46
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:met00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M446_6254
Enzymes [BR:met01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M446_6254
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M446_6254
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
6873185..6874078
Genome map
AA seq 297 aa AA seqDB search
MPELPEVETVRRGLEPALVGARFTTVHLARPDLRFPLPARFAARLTGQRVEALSRRAKYL
VADLSSGDALIMHLGMSGRFDVVFPDGRQLSPGEFYLEGAPGQAKHDHVVFALSNGARVT
YNDVRRFGFMDLVRRAELETCRHFAGMGIEPLGSDLSGEAVARLFRGRRTPLKAALLDQR
LIAGLGNIYVCEALHRARLHPEAAAGTLADAAGRPTRAAARLAQVIRDVLTEAVAAGGST
LRDYAHTDGTQGAFQHRFRVYDREGLACTARGCRGRVRRIVQAGRSTFYCETCQPAP
NT seq 894 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgagaccgtgcgccggggcctcgaacccgccctcgtcggc
gcgcgcttcacgacggtccacctcgcccgccccgacctgcgctttccgctgcccgcgcgc
ttcgccgcgcgcctcaccggccagcgggtcgaggccctgtcgcggcgcgccaagtacctc
gtggccgacctctcctcgggcgacgcgctgatcatgcatctgggcatgagcgggcgcttc
gacgtcgtgttcccggacgggcgccagctctccccgggcgagttctacctcgaaggcgcc
ccgggccaggccaagcacgaccacgtcgtcttcgcgctctcgaacggggcgcgggtgacc
tacaacgacgtgcgccgcttcggcttcatggacctcgtgcggcgggcggagctggagacc
tgccgccacttcgccgggatggggatcgagccgctcggcagcgacctctcgggcgaggcg
gtggcgcggctgttccggggccggcgcacgcccctcaaggccgcgctcctcgaccagcgg
ctgatcgccggcctcggcaacatctacgtctgcgaggcgctgcaccgcgcccggctgcat
cccgaggccgcggccggcaccctggccgacgcggcgggccggcccacccgcgccgccgcc
cgcctcgcccaggtgatccgcgacgtgctgaccgaggccgtcgcggccggcggctcgacg
ttgcgcgactacgcgcacacggacggcacccagggggccttccagcaccggttccgcgtc
tacgaccgggaggggctcgcctgcacggcgcggggctgccggggcagggtgcggcggatc
gtgcaggcgggccgctcgaccttctactgcgagacctgccagccggcgccctga

DBGET integrated database retrieval system