KEGG   Methylobacterium sp. AMS5: Y590_08920
Entry
Y590_08920        CDS       T04283                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
meta  Methylobacterium sp. AMS5
Pathway
meta03030  DNA replication
meta03430  Mismatch repair
meta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:meta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Y590_08920
   03430 Mismatch repair
    Y590_08920
   03440 Homologous recombination
    Y590_08920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meta03032]
    Y590_08920
   03400 DNA repair and recombination proteins [BR:meta03400]
    Y590_08920
Enzymes [BR:meta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Y590_08920
DNA replication proteins [BR:meta03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Y590_08920
DNA repair and recombination proteins [BR:meta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Y590_08920
SSDB
Motif
Pfam: DNA_pol3_gamma3 DUF3646 DNA_pol3_delta2 AAA AAA_22 RuvB_N AAA_18 AAA_30 AAA_14 AAA_19 AAA_5 TsaE AAA_assoc_2 AAA_16 SRP54 AAA_24 nSTAND3 Rad17
Other DBs
NCBI-ProteinID: AMB45017
Position
complement(1901579..1903447)
AA seq 622 aa
MDETHGTFPDEPGLPGMPAPAPAAAPYRVLARKYRPQTFDDLIGQGAMVRTLGNAFAANR
IPQAWMLTGVRGVGKTTTARILARGLNYLRTGQPDTGPTVSMPELGQHCQAIMESRHMDV
LEMDAASHTGIDDVRGIIDGIRYSPVSARYKVYIVDEVHMLSEKAFNAFLKTLEEPPPHA
KFVFATTEIRKVPVTILSRCQRFDLRRVEADVLSAHLKKICAAEGVEAEDEALAAVTRAA
EGSVRDALSLLDQAIAHGAGAVSAAGVRDMLGLADRSRIVDLFEAVMRGDVPAAFAEIRA
QYDAGADPAVVLSDLASFTHLVTRLKLVPGAEADPTLSEAERVRGVAFAGRLPVRALSRA
WQILLKALPEVQAAPRPLAAAEMAIVRLAYAADLPTPDEALRQLRADIASSEGNGAARPS
LGRDGGSAMASHGSAALQMAPPAPQPSPRPTLAAVPSPVTAAAPQPASRPAPVAPAGPRL
GRFEDVVAQAEAARDIALKVALERDVHLVRFEEGRIEFRLAPGGRQSLPTDLARALDAWT
GRRWLVALSKEPGAPTIAEHSRAAEETRHQNAAAHPLVREVLSRFPGAQIVDVRDKSPET
ADAAADGAGPAAPPPEETDDDA
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggacgagacgcacggcacgttccccgacgagccgggcctgcccggcatgcccgccccc
gcgccggccgcggccccctatcgcgtcctggcgcgaaaatatcgcccccagaccttcgat
gacctgatcggccagggcgccatggtgcgcacgctgggaaatgcgttcgcggccaaccgc
atcccgcaggcctggatgctcacgggcgtgcgcggcgtcggcaagacgaccaccgcccgc
atcctcgcccgcggcctcaactacctgcgcaccggccagccggataccggccccaccgtg
tcgatgccggaactcggccagcactgccaggcgatcatggaatcccggcacatggacgtg
ctggagatggatgccgcctcgcataccggcatcgacgatgtgcgcggcatcatcgacggc
atccgctactcgccggtctcggcccgctacaaggtctacatcgtcgacgaggtccacatg
ctctcggagaaggcgttcaacgccttcctgaagacgctggaggagccgccgccccacgcc
aagttcgtgttcgcgaccaccgagatccgcaaggttccggtgacgatcctgtcgcgctgc
cagcgcttcgatctgcgccgggtcgaggccgacgtgctctccgcccacctgaagaagatc
tgcgcagcggaaggggtggaggccgaggacgaggcgctcgccgccgtcacccgcgccgcc
gagggctcggtgcgcgacgcgctctcgctgctcgatcaggccatcgcccacggggcgggc
gcggtctcggctgcgggcgtgcgcgacatgctgggcctcgccgaccgctcgcgcatcgtc
gatctgttcgaggccgtgatgcgcggcgacgtgccggccgccttcgccgagatccgcgcg
cagtacgacgcgggtgccgacccggcggtcgtgctctcggatctcgccagcttcacccat
ctcgtcacccgcctcaagctggtgccgggggcggaggccgacccgaccttgagcgaggcg
gagcgcgtgcgcggcgtggcgttcgccgggcgcctgccggtgcgggcactgtcgcgggcg
tggcagatcctgctcaaagcgttgcccgaggtgcaggccgccccccgcccgctcgccgcc
gccgagatggcgatcgtacggcttgcctatgctgccgacctgccgacgcccgacgaggcc
ctgcgccagcttcgcgccgacatcgcctcgtccgagggcaacggcgccgctcgcccgagc
ctggggcgcgacggcggctccgccatggcctcgcacggctcggccgcgttgcagatggcg
ccgcccgccccgcaaccctcgccccggccgaccctggccgcggttccctcccccgtcacg
gccgctgcgccccaacccgcatcgcgcccggctccggtggcccctgccggtccgcggctc
gggcgcttcgaggacgtggtcgcccaggccgaggcggcccgcgacatcgccctcaaggtg
gcgctggagcgcgacgtgcatctggtgcgcttcgaggaggggcggatcgagttccgcctc
gcgcccggcggccggcagagcctcccgaccgatctcgcccgcgccctcgatgcctggacc
ggacggcgctggctggtggccctctccaaggagcccggcgcgccgacgatcgcggaacac
tcgcgggcggccgaggaaacccgccaccagaacgccgccgcccacccgctggtgcgggaa
gttctgtcgcgcttccccggcgcgcagatcgtcgatgtgcgggacaaatcgccggagacc
gccgacgccgcggcggacggcgccgggccggcggcccctccgcccgaagagacggacgac
gacgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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