KEGG   Methanobacterium sp. MB1: MBMB1_0067
Entry
MBMB1_0067        CDS       T02957                                 
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
meth  Methanobacterium sp. MB1
Brite
KEGG Orthology (KO) [BR:meth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:meth03016]
    MBMB1_0067 (truD)
Enzymes [BR:meth01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     MBMB1_0067 (truD)
Transfer RNA biogenesis [BR:meth03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MBMB1_0067 (truD)
 Prokaryotic type
    MBMB1_0067 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: CDG64186
UniProt: U6E9I6
Position
63878..65131
AA seq 417 aa
MLNAETYITSQKGIGGEIRTINEDFYVEEIPETPPSGEGPNTWIWIEKNGRTTLDVVLDI
ARELKINRKQMGFAGMKDKRALTRQWICISNKTPEEIQGLEDKLHNVKIINIVPHQKKLR
MGQLIGNKFRLMVRGVGDTELAAQEATKILNELEKRGVPNYYGFQRFGKDRPNTHLVGKA
LIKGGVKDAVDRYIGHPYDTEPQHIQEARRLYDQGKLEESLESMPSGMRYEKMMLRTLIK
EKNKRGELVENSYIKALLSLPKPLSRMFVHAYQSYLFNRAVSERSKLGIDQYVEGDILID
NEEHLIHEFFPEEINQKIKNFQAHPSSPLYGSKVPLAGGKLGEMEQKILDEENLKLEDFE
VPSMPKLGSHGIRRAMRFKIWDVDAEATEEGVLLSFSIPKGCYATSVLREVMKKDVY
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttaaacgcagaaacttacataacttctcagaaaggaattggaggcgaaatccggacc
ataaatgaagatttctacgtagaagaaatcccggaaactccacccagtggtgaaggaccc
aacacttggatctggattgaaaaaaacggcagaaccactctagatgttgttctggatatt
gcccgtgaactaaaaatcaaccgtaaacagatgggattcgccggaatgaaggataaaaga
gcccttaccagacaatggatttgtatcagtaataaaactcctgaagaaattcagggattg
gaagataaactccataatgttaaaataatcaacatagtcccccatcagaaaaaattacgt
atgggacagttgatcggaaacaagtttcgtttaatggtgcgcggtgtgggtgacactgaa
ttggcagctcaagaggcaacaaaaatccttaatgaactggaaaaaaggggagtacccaac
tattatggattccaacgtttcggtaaggataggcctaacacccacctggtgggtaaagct
ctgatcaagggaggtgttaaagatgcggtggatcgctacattggccatccctatgataca
gaacctcaacacatccaggaagcccgcagattatatgatcagggaaaactggaagaatcc
ctggaatcaatgcccagcggaatgagatatgaaaaaatgatgctacgtaccctcattaaa
gaaaaaaataaacgtggcgaattggttgagaattcttatatcaaagcattgctgagcctt
cccaaacccctcagtaggatgtttgtccatgcctatcagtcctacctgttcaaccgagca
gtcagtgaacgcagtaaactaggcattgaccaatacgtggaaggggatatcctgattgat
aatgaagaacacctgatccatgaatttttcccagaagaaattaatcaaaaaataaagaac
ttccaggcccatccttcctcacccctttatggtagtaaagtgcccttggctggcggaaag
ttgggagagatggaacagaaaattttggatgaggaaaaccttaaactagaggattttgag
gtaccgtcaatgcctaaattaggcagccatggcatacgccgggctatgaggttcaaaata
tgggatgttgatgccgaagcaactgaagaaggagtattgttaagcttttccattcccaaa
ggctgctatgctaccagtgttctgcgagaggttatgaagaaagatgtttattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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