KEGG   Methylophilus sp. TWE2: ACJ67_02300
Entry
ACJ67_02300       CDS       T04002                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
meu  Methylophilus sp. TWE2
Brite
KEGG Orthology (KO) [BR:meu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meu03032]
    ACJ67_02300
   03400 DNA repair and recombination proteins [BR:meu03400]
    ACJ67_02300
Enzymes [BR:meu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ACJ67_02300
DNA replication proteins [BR:meu03032]
 Prokaryotic type
  DNA Topoisomerases
   ACJ67_02300
DNA repair and recombination proteins [BR:meu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ACJ67_02300
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom HC2 Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: AKR42387
UniProt: A0A0K0SSZ8
Position
complement(498747..501317)
AA seq 856 aa
MSKLLIVESPSKAKTLKKYLGGDFEVLASYGHVRDLIPKNGAVDPAQQFAMKYDIIDRNS
KHVDAIAKAVKNADSIYLATDPDREGEAISWHIAEILAEKKLIKNKLLKRVEFNEITQTA
VKHAIDHPRDISMDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVE
RELEIEAFTSQEYWSIHMSALKHAHGFDAKLIQLNGQKVEQFTVTNHDQQADIVGKLLLA
SAGKTTVTRVEKKQRSRSPAAPFTTSTLQQEAVRKLGFTTSRAMRVAQQLYEGMDVGSGT
VGLITYMRTDSFSLATEAVMQIRDYVKKHFDADYLPKAPIMYKTKAKNAQEAHEAIRPTD
ITRTPASVRQYLNDEQFKLYEMIWKRTLACQMTQAKYDAVSVDLSVGSEANLFRASGQTL
IFPGFIAVYMEGKDDDKDDEDAEAKLPHLETGEILTVEKIFGEQHFTEPPPRYSEASLVK
ALEEYGIGRPSTYASIISTLQDREYVLLDKKRFTPTDVGRVVNKFLTEHFTQYVDYDFTA
KLENELDEIAEGNLEWVPVMDKFWQGFNQQIQVKADVERPGNELIDEFCPKCGRQLQKQL
SRYGSFIGCTGYNATPKCDYKRNLDGEVNNASEPTVIGLDAETQKEIYLMNGPYGPYLQV
GQPVEGEKKKPKRVSIPKEIPLSQINIDTANMLLSLPRDLGQHPETGKKIVANIGRFGPY
VNHDGKFKSIPKTESVFSIDLEGAVKLLAAAGGPAPLADLGEHPSGEGRIEVFSGRFGPY
VQHNGIRATLPKSVTPEELTVEQALELLAEKAAKEGGKTAGKKTTAKKSAAKKPAAGKTT
ATKTAASKRAKKTATE
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgtcaaaactgctgatcgttgaatctccttccaaggccaaaaccctcaaaaaatatttg
ggcggtgattttgaggtcctggcttcttacgggcacgtgcgcgacctgatccccaaaaac
ggcgcggttgacccggcacagcaattcgcgatgaagtacgacatcatcgaccgcaatagc
aaacacgtcgatgccattgccaaagcggttaagaatgccgacagcatttacctggcaacc
gacccggaccgcgaaggggaagcgatttcctggcatattgccgagattctggccgagaaa
aaactgattaaaaacaagctgctcaaacgcgtcgaatttaacgagatcacgcagacggcg
gtaaaacatgccattgaccatccgcgcgacatctcgatggacctggtcaatgcgcagcaa
gcgcgccgcgcgctggattacctggtgggctttaatctttcgccgttgctgtggaaaaaa
atccgccgcgggctgtctgcgggccgcgtacaaagcccggccttacgcctgattgtcgag
cgagagctcgaaatcgaagcctttaccagccaggaatactggagcatccacatgagcgcg
ctcaagcatgcgcatgggttcgatgccaagctgatacagctcaatggccagaaagtagag
caattcacggtcaccaaccatgaccagcaggcagatatcgtcggtaagctgttactagcc
tctgccggtaaaacgacggtgacgcgtgttgagaaaaagcaacgcagccgcagcccggcc
gcaccattcaccacctccaccctgcaacaggaggccgtacgcaaactcggctttaccacc
agccgcgccatgcgggtggcacagcaactgtatgaaggcatggacgttggcagcggcacg
gtggggttgattacctatatgcgtaccgactcgttcagcctggccactgaagccgtgatg
caaatccgtgactacgtgaaaaagcactttgatgcagactacctgcccaaagcgcccatc
atgtacaaaactaaagccaaaaatgcgcaagaggcgcacgaggcgatccggcccactgac
attacacgtacacctgccagcgtgcgtcagtacctgaacgacgaacaattcaaattgtat
gaaatgatctggaagcgtaccttggcttgccagatgacacaggccaaatatgacgccgtc
agtgtcgacctgtcggtaggcagcgaggctaatctgtttcgcgccagtggtcagaccctg
attttcccgggctttattgccgtctatatggaaggcaaggacgacgacaaggatgacgaa
gacgcagaagcgaaattgccgcatctggaaactggtgagatactgacggtagagaagatt
ttcggtgaacagcactttaccgaaccaccgccgcggtattctgaagccagcctggtcaag
gcgctggaagaatatggcatcggtcgcccttcaacctatgccagtattatttctaccctg
caagaccgcgaatatgtattgctcgataaaaagcgctttacaccaactgatgtcggccgt
gtcgtcaataagttcctgaccgagcactttacccaatatgtcgactatgactttacggct
aagctcgagaacgagctggatgagattgcggaaggcaacctggaatgggtgccagtcatg
gacaaattctggcaaggctttaaccagcagattcaagtcaaagccgatgttgaacgtcct
ggcaatgaactgatcgacgagttctgcccaaaatgcggccgccagttgcagaaacagctt
agccgttatggcagctttatcggctgtaccggctataacgcgacacctaaatgcgattac
aaacgcaatctggatggtgaagtcaataacgcgagcgagcctaccgtcattggcctggat
gcagagacgcagaaggaaatctacctgatgaacggcccttatggtccatatctacaggtc
ggccaaccggttgaaggcgaaaagaaaaagcctaagcgcgtcagcattcccaaagagata
ccgctgagccagatcaatattgatacggcaaacatgctactgagtttgccgcgtgacctg
ggccaacaccctgaaacaggtaaaaaaattgtcgcaaatatcggccgcttcgggccttat
gtgaaccatgatggcaagtttaaatcgatcccaaaaaccgagagcgtcttcagcatagac
cttgaaggtgcagtcaaactgctggcagctgccggtggccctgccccactggcagacctg
ggtgaacacccatcaggcgaaggacggattgaggtattttcaggacgttttggcccctac
gtacaacataatggcattcgtgcaacgctgcctaagagcgtgacaccagaggagctgacg
gtagagcaggcgctggagctcctggccgagaaagccgctaaagagggtggtaaaactgct
ggcaaaaaaaccacagccaaaaagtcagcggccaagaaaccggctgcaggcaaaaccaca
gcgaccaaaaccgctgcaagcaaacgcgctaaaaagacagcaacagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (51)   

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