KEGG T01261: Metev

Methanohalobium evestigatum: Metev_0890

Entry

Metev_0890 CDS T01261

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mev Methanohalobium evestigatum

Pathway

mev03030	DNA replication
mev03410	Base excision repair
mev03420	Nucleotide excision repair
mev03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mev03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mev03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mev03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mev03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(846413..848122)

AA seq 569 aa
MTSFKQFADACKNIEKITSSLEMTDQVADLLAKVDTDELPVVTHFIMGQIFPSWSSQELG
IGESLLYTALSKASGLSVDDIENIIRDTGDIGETAVRALSKLSRNQVTFSSFVEEPTPQI
TILEVSDRLKRIANVSGKGSQNQKVKNLQYLFNASSPEEARYLSRLAVEELRIGVGEGIV
RDAISKAFNVPVEKLERSFMLTNDLGAVAVAAQQGGEEEVSKLDIQVNRPVRMMLAQVTP
SIETAFNEMGTAAIEWKFDGARVQIHKDKEEVNIFSRKLENVTNSLPDIVESVKNQLNAD
TAIIDGEAVAIDEDGRPRAFQDILRRFRRKYDVLSTSKEIPIILNMFDLMYLDGESYIDL
PLKYRREILGNIVENTKSIKVDKQILTSDVEEANRVYNNALSAGHEGIMIKNPESPYSPG
KRGKNWLKKKPIMETLDLVVIGGEWGYGRRANLIGSYAIACYDRDRGQYLPIGKVATGIT
DEKLEELTSLFSDLIVSEKGRKIEFKPEIVFEIGFEEIQKSNNYESGYALRFPRLVNVRD
DKSPEESDTIERIEDIYLKQRSRNHNNSS

NT seq 1710 nt +upstreamnt +downstreamnt
atgacaagtttcaaacaattcgcagatgcctgcaagaatatagaaaaaattaccagttcc
cttgagatgacagaccaggtagcagatttactggctaaagtagatacggatgagttacca
gtggtgacacattttataatgggtcagatatttccttcatggagttctcaggaacttggt
atcggtgaaagtcttctctatacagcactttccaaagcatctggtttatcagttgatgat
attgaaaacataatccgtgatacaggtgatataggagaaaccgcagtaagggcactgtca
aaattgtccaggaaccaggttactttttcgtcttttgttgaagaaccaacgcctcagatt
acaatacttgaagtttcagaccggctcaaacgtatagccaatgtatcaggtaaaggttca
cagaaccagaaagtaaaaaaccttcaatatctgttcaatgcatcttctcctgaagaggca
aggtatctttcaagactcgcagtcgaagagttaaggataggagttggagagggtatagtt
cgtgatgcaatatcgaaggctttcaatgttccagtagaaaagctggaacgcagttttatg
ctgacaaatgatttgggtgcagtggcagtagctgctcagcagggaggtgaagaggaagtt
tcaaaacttgatatacaggtaaaccgtcctgtcaggatgatgcttgcacaggttacgcca
agcattgaaactgcgtttaatgagatgggtactgcagcaatcgagtggaaattcgatgga
gcaagagttcagatacacaaggacaaggaagaggtaaacatattctcaaggaaacttgaa
aacgttaccaattctcttcccgatattgttgaatctgtcaagaaccagttgaatgccgat
actgcaattattgatggtgaagcggtggcaatagacgaagatggacgtccacgtgctttt
caggatattttgaggcgttttagacgaaaatatgacgtattgtctacatccaaagaaatt
cctattattttgaatatgtttgatcttatgtatcttgatggtgaaagttatatcgacctg
ccgcttaaatacagaagagagatacttggaaacattgttgaaaacactaaatcaattaaa
gtggataaacaaatcctaaccagtgatgttgaagaggctaacagggtatacaataatgca
ctatcagcaggtcatgaaggtatcatgattaaaaaccctgaatcaccgtattcacccggt
aaacgtgggaaaaactggctaaagaaaaaacccataatggagacacttgaccttgttgtt
atagggggagaatggggttatggaagaagagccaatctcatcggttcatatgctatcgct
tgctatgacagggataggggtcaatatttgcctatagggaaagtggcaacaggtatcacc
gatgaaaaactggaagaacttaccagtcttttctcagatttgatagttagtgaaaaaggg
cgaaaaatagaattcaaacctgaaatcgtttttgaaattggatttgaagaaatccagaaa
agcaacaattacgaatcaggttatgcgctccgatttccaagacttgtaaatgtcagggat
gataaatcacctgaagagtcagacacaatagaacgtatagaagatatttacctgaaacaa
agaagcaggaatcataataattcttcttga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MEV (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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