KEGG   Methylobacterium extorquens PA1: Mext_4046Help
Entry
Mext_4046         CDS       T00640                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mex  Methylobacterium extorquens PA1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mex00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Mext_4046
Enzymes [BR:mex01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Mext_4046
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mext_4046
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
4502787..4503686
Genome map
AA seq 299 aa AA seqDB search
MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL
TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGATVT
YNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAALLDQR
LIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVAAGGST
LRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQVLPVR
NT seq 900 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgagaccgtgcgccgggggctcgcccccgcgatggtcggg
gcgcgcgtcgcccgcgtcaccctgcgtaggccgaacctgcgcttccccttccccgagcgc
ttcgccgagcggctggagggcaccacggtgctggaactggcgcgccgggccaaatacctc
acggcgcatctcgattccggcgagagcctgatcctgcatctcggcatgagcgggcgcttc
gacgtgcgtctgcccgacggctcgaacctctcgccgggcgacttctaccttgaaggggcg
ctcggcacgcccaagcacgaccacgtggtgatggccttcgccaacggtgccaccgtcacc
tacaacgacgcccgccgcttcggcttcatggatctcgtggccacgcgcgatctcgagacc
tgccgccacttcgccagcatgggcgtcgagccgctctccgacgccctcgacgcaccccgg
ctcgcgcgcctgttcgcccggaagatcacgccgttgaaggcggcactgctcgaccagcgc
ctgatcgcgggcctgggcaacatctatgtctgcgaggcgctgcaccgctcgggcctccac
ccggccctgccggcgggcgcgctcgccaagcccgacggttcgccggcgcccaaggcgaag
acactcgtcaaggagatcaaggcggtgctgacggaggcagtggcggccggcggctccacc
ttgcgcgactacgcccggccggacggggagcgcggcgccttccagcacggcttccgcgtc
tacgaccgggtgggccatgcctgcccgaccaagggctgtaccggccgaatcggccggatc
gtgcagggtggacgctcgaccttcttctgcgaaacctgccaggtcctgccggtccggtaa

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