KEGG   Martelella endophytica: TM49_21460
Entry
TM49_21460        CDS       T03801                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mey  Martelella endophytica
Brite
KEGG Orthology (KO) [BR:mey00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mey03032]
    TM49_21460
   03400 DNA repair and recombination proteins [BR:mey03400]
    TM49_21460
Enzymes [BR:mey01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TM49_21460
DNA replication proteins [BR:mey03032]
 Prokaryotic type
  DNA Topoisomerases
   TM49_21460
DNA repair and recombination proteins [BR:mey03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TM49_21460
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom HC2 IlvN
Other DBs
NCBI-ProteinID: AJY48426
UniProt: A0A0D5LWQ2
Position
4596621..4599296
AA seq 891 aa
MDVVVVESPAKAKTINKYLGKDYKVLASFGHVRDLPAKDGSVLPDDDFSMSWQVDTASAK
RVKDIAEAVKSADGLILATDPDREGEAISWHVLDLLQKKKVLKDKPVKRVVFNAITKKAV
LDAMANPRDIDEALVNAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ENEIERFVPEEYWNIVADLKTVRGDAFEARLVQADGKRVQKNSVKNQEQAHRIRDLLEGA
TYSVASVEAKPVRRNPGPPFTTSTLQQAASSRLGFSASRTMQVAQRLYEGIAIGGETAGL
ITYMRTDGVSMAPEAVTAARDAIGDQFGTRYLPESARHYSVKAKNAQEAHEAIRPTDFTR
TPQSVKKYLDADQFRLYDLVWKRGIASQMASAEMERTTAEITAAKGGESAGLRAVGTVVK
FDGFLAAYADNREEKQPSDEDDDDGRLPEINQGENVDKDKIRATQHFTEPPPRYSEASLI
KKLEELGIGRPSTYASTLATLRDREYVTIENRKLTPEAKGRLVTAFLENFFNRYVEYDFT
AELEEKLDKISDGSLEWKQVLRDFWKDFFAQVEDTKELRVTNVLDALNEALAPLVFPKRE
DGSDPRTCQVCGTGKLSLKLGKYGAFVGCSNYPECNFTRQLGADAEADAANSNEPNELGT
DPETGEPVTLRSGRFGPYVQRGEGKEAKRSSLPKGWKPEDIDLEKALQLLSLPREVGAHP
EDGKMITAGLGRYGPFVLHDGTYANVDSIEDVFSVGVNRAVSIIADKRANGGRRRSAPAA
LKSLGEHPEGGGEVTVNDGRYGPYVKWGKINATIPKGKDPQSITMEEAIPLLAARAEKAG
VKKPAKKAAAKKPAAKKTAAKKTTAKSKTASATKKTTASKKTSAEAEKSDS
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggacgtagtcgtcgttgaatcccctgccaaggccaaaaccatcaacaagtaccttggc
aaggactacaaggtattggcctctttcggccatgtgcgcgatctgccggccaaggacggc
tccgtgctgccggacgacgacttctcgatgtcctggcaggtcgacacggcctccgccaag
cgggtgaaggatatcgccgaggcagtcaagtccgccgatggcctgatcctcgcaaccgac
ccggacagggaaggcgaagcgatttcctggcacgtcctcgacctgctgcagaagaagaag
gtgctgaaggacaagccggtcaagcgtgtcgtcttcaacgccatcaccaagaaagccgtg
ctcgacgcgatggccaatccgcgcgatatcgacgaggcgctggtgaatgcctatctcgcc
cgccgcgcgctagactatctcgttggcttcaacctgtcgccggtgctgtggcgcaagctg
cccggcgcccgctcggccggccgcgtgcagtcggtcgcgctgcgtcttgtctgcgaccgc
gaaaacgagatcgagcgcttcgttcctgaagaatactggaacatcgtcgccgacctgaag
acggtgcgcggcgacgccttcgaggcgcggctggtgcaggccgacggcaagcgcgtccag
aagaactcggtgaagaaccaggaacaggcccaccgcatccgcgacctgctcgagggcgcg
acctattcggtggcgagcgtcgaggccaagcccgtccgccgcaatcccggcccgcccttc
accacctcgaccctgcagcaggcagcgtcctcgcgtctcggcttttccgcctcgcgcacc
atgcaggtggcgcagcggctttacgaaggcatcgcgatcggcggcgagacggccggtctc
atcacctatatgcgtaccgacggcgtctccatggcgccggaggccgtgacggctgcgcgt
gacgcgatcggcgaccagttcggcacccgttatctgcccgaaagcgcccgccactattcg
gtgaaggcgaagaacgcgcaggaggcccatgaggcgatccgcccgacagacttcacccgc
acgccgcaatcggtgaagaaatacctcgatgccgaccagttccgcctctacgatctcgtt
tggaagcgcggcattgccagccagatggcatcggccgagatggaacgcaccaccgccgaa
atcaccgccgccaagggtggcgaaagcgccgggctgcgcgccgtcgggacggtcgtcaag
ttcgacggcttcctcgccgcctatgccgacaatcgcgaggaaaagcagccctccgacgag
gatgacgatgatggtcgtctgcccgagatcaaccagggcgaaaacgtcgacaaggacaag
atccgcgccacccagcacttcaccgagccgccgccgcgctattcggaagcctcgctgatc
aagaagctcgaagagctcggcatcggccggccgtcgacctatgcctcgacgctcgcgacg
ctgcgcgaccgcgaatacgtcaccatcgagaaccgcaagctgacacccgaggccaagggc
cggctggtgacggccttcctcgagaatttcttcaaccgctacgtcgaatatgacttcacg
gcggaactcgaggaaaagctcgacaagatttccgatggctcgctggagtggaagcaggtt
ctgcgcgacttctggaaggatttcttcgcccaggtcgaagacaccaaggagctgcgcgtc
accaatgtgctggatgcgctgaacgaggcgctggcgccgctggtgttcccgaagcgggag
gatggctccgatccgcgtacctgccaggtctgcggcacgggcaagctgtcgctgaagctc
ggcaagtacggcgccttcgtcggctgctccaactatccggagtgcaacttcacacgccag
ctcggcgccgatgccgaggcggatgccgccaattccaacgagccgaacgagcttggaacc
gatccggaaaccggcgagcctgtcacgctgcgctccggccgtttcggaccttatgtccag
cgtggcgaaggcaaggaagccaagcgctcgtcgctgccgaagggctggaagccggaggat
atcgacctcgaaaaggcgctgcagcttctgtcgctgccgagagaggtcggcgcgcatcct
gaagacggcaagatgatcaccgccgggctcggccgctacggacccttcgtcctgcatgac
ggtacctacgccaatgtcgacagcatcgaggacgtgttttccgtcggcgtcaaccgcgcg
gtctcgatcatcgccgacaagcgcgccaatggcggccgccgacgctctgcgcccgcggcg
ctcaaatcgctcggcgaacatcccgaaggcggcggcgaagtgaccgtcaatgacggccgc
tacgggccctacgtcaaatggggcaagatcaacgcgaccatccccaagggcaaggacccg
cagtcgatcaccatggaagaagccattccgcttctcgccgcacgtgccgaaaaggccggc
gtgaagaagccggcgaaaaaggctgccgcgaagaagcccgcagccaagaagaccgcggcg
aagaagacaaccgcgaaatccaaaaccgcatcggcaacgaagaagacgaccgcttcgaaa
aagacgtcggccgaggctgaaaagagcgacagttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

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