KEGG T00976: Mefer

Methanocaldococcus fervens: Mefer_0746

Entry

Mefer_0746 CDS T00976

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mfe Methanocaldococcus fervens

Pathway

mfe03030	DNA replication
mfe03410	Base excision repair
mfe03420	Nucleotide excision repair
mfe03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mfe03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mfe03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mfe03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mfe03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

694207..695928

AA seq 573 aa
MLWKEVCEIFNKIEKTTKRLEKRDYFIKLIDMAKEKGKPEDLKKICYMAIGRVYPEYDER
ELGVGEKLLINAVTSIGINKDELLEKIKETGDIGLAIEQLKSKIKQAYLFFQPLTVDEVY
ETLRRVGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDTLSL
YFNVPREKLEKIYAITNDIGLLAEKLLKGDLESDELRLKLFRPIKPMLAQLAPSIEEALL
EMGRAQFETKYDGARVQIHKEGNKVRIYSRRLEDVTNALPEIVEAVKKIDVERLIVEGEC
VAIDKETGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDILYKDGISFIDEEFGNRRK
VLEEIIGYENDWRTEKERIEKELKSDKIIDISYKLVTNDAKEAREFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLESLDVVITKAKRGMGKRKDWYGSFEIAVRDEEGNLYP
IGHVGTGLTESDLEMLKEEIDKIIIRDLGEEVEVEPKIVVEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGKDDINTIEDVKRIYEIQRSRK

NT seq 1722 nt +upstreamnt +downstreamnt
atgctttggaaagaggtttgtgagatatttaacaaaattgaaaaaaccacgaaaagattg
gaaaagagggactattttataaaattaattgatatggctaaggagaaaggtaagccggag
gatttaaaaaagatttgctatatggcgataggaagagtttatcctgaatacgatgaaaga
gagctcggagttggagaaaaactcctaataaatgcagttacctccattggaattaacaag
gatgaattattggaaaaaattaaagagacaggagatattgggttagctatagaacagtta
aaatcaaaaattaaacaggcatatctattctttcaacccctaacagtagatgaagtttat
gaaactttgaggagagttggagaaatagagggggagggctctcaaaagaaaaagttgagg
ttgataagcagtttatttttaagggcttcaccaatagagtgtagatatttggcaaggcta
atactggaagatatgaggataggaatgaacgttccaaccatattagatacattatcatta
tatttcaacgtcccaagggagaaattggagaagatatatgcaataaccaacgatattggt
cttttagctgaaaagttgctaaaaggagatttggaaagtgatgagttgagattaaaatta
tttagaccaataaagccaatgttggctcaattagctccttcaattgaagaggcattattg
gagatgggtagggcacaatttgaaacaaaatacgatggggctagagtgcagatacataaa
gagggcaataaggttagaatttacagtagaaggttagaggatgttacaaatgcacttcca
gagattgttgaggcagttaaaaaaattgacgttgaaaggttgattgttgaaggggagtgt
gtggctatagataaagaaactggaaagccaaggccgtttcaggatatattaagaaggttt
agaaggaagtatgatattggaaaaatgatgaaagaaataaacttaagggtttatttgttt
gatatcctttacaaagatggtatatcatttatagatgaggaatttggaaatagaaggaaa
gttttagaggaaattattggttatgagaatgattggagaactgaaaaagagaggatagag
aaggagcttaaatcagataaaataatagacatatcttataaattagttacaaacgatgca
aaagaggcaagagaattttacaattggtctctatccattggacacgagggagttatgatt
aaaaacttgaaagccccttacactccaggaagtagggttagaacgatgtataaattcaag
ccaactcttgagagtttagatgttgtcataacaaaggcaaagagagggatggggaagaga
aaagattggtatgggtcatttgagatagctgttagagatgaagaaggaaatctctatccc
atagggcatgttggaactggattaactgaaagcgatttagagatgttgaaggaggagatt
gataagataataattagagatttaggagaagaggttgaagtagagccaaagatagttgtt
gaagttgcctatgaagagattcaaaaatctgataaatatccttgtggctatgctttaaga
ttcccaagggttgtaaggtttagatttgataaagggaaggatgatataaacaccatagaa
gatgttaagaggatttatgagattcaaaggagtagaaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MFE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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