KEGG   Methanocaldococcus fervens: Mefer_1401
Entry
Mefer_1401        CDS       T00976                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mfe  Methanocaldococcus fervens
Pathway
mfe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mefer_1401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfe03019]
    Mefer_1401
   03009 Ribosome biogenesis [BR:mfe03009]
    Mefer_1401
Enzymes [BR:mfe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Mefer_1401
Messenger RNA biogenesis [BR:mfe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Mefer_1401
Ribosome biogenesis [BR:mfe03009]
 Prokaryotic type
  rRNA helicases
   Mefer_1401
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 AAA_30 SPA
Other DBs
NCBI-ProteinID: ACV25208
UniProt: C7P9H6
Position
1316377..1317465
AA seq 362 aa
MSFSELNLSENVLNAIKNKGFEKPTDIQMKVVPLFLNESCNIVAQARTGSGKTASFAIPL
IELIDEDSGIEAIILTPTRELAIQVADEIDSLKGNKNLKITKVYGGKAIHPQIKALKKAN
IVVGTPGRVLDHINRGTLNLKNVKYFILDEADEMLNMGFIEDVEKILNACNKNKRILLFS
ATMPKEILNLAKKYMGDYEFVKAKINANIEQSYIEINENERFETLCRILKDREFYGLVFC
KTKKDTKDLANMLRDIGFKAGAIHGDLNQSQREKVIRLFKQKKIKILIATDVMSRGIDVN
DLNCVINYHLPQNPESYMHRIGRTGRAGKKGMAISIINRREYRKLKHIERKMKLKIRKLK
IK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgagttttagtgaattgaatttgtcagaaaatgtgttaaacgctattaagaataaaggt
tttgaaaaaccaacagatattcagatgaaagttgtcccactatttttaaatgaaagttgc
aatattgttgctcaagcaagaactggtagcgggaaaactgcttcatttgcaattccatta
attgagcttattgatgaagatagtgggatagaagctattattttaactccaacaagagaa
ctggctattcaagtggctgatgagatagactcattaaaaggtaacaaaaatttaaagata
actaaagtttatggaggaaaagcaattcatcctcaaattaaagctttaaaaaaagctaat
atagttgtcggaacacctggaagagttttagaccatataaatagaggaactttaaactta
aagaatgttaaatactttatattagatgaagcggatgaaatgcttaatatgggattcatt
gaagatgttgagaagattttaaacgcatgtaataaaaataaaaggattctgttattctct
gccaccatgccaaaggagatactaaatttggctaaaaaatatatgggagattatgagttt
gtaaaagctaagataaatgcaaatattgagcagagttatattgagataaatgaaaatgaa
agatttgaaactttatgtagaattttaaaagatagagagttttatggattagttttttgt
aaaacaaagaaggatactaaagatttggcaaatatgttgagagatattggatttaaagca
ggagcaattcatggagatttgaatcaatctcagagggagaaggttataaggctgtttaaa
caaaagaaaattaagattttaatagcaaccgatgttatgagtagaggaatagatgtaaat
gatttaaactgtgtaattaattatcatctcccacaaaatcctgaatcttacatgcacagg
attggaagaacaggaagagctggaaagaaaggaatggcgatatcaattattaataggaga
gagtataggaaattaaaacatatagagagaaaaatgaaattaaaaattagaaaattaaaa
attaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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