KEGG   Methanobacterium formicicum DSM1535: DSM1535_0670
Entry
DSM1535_0670      CDS       T03743                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mfi  Methanobacterium formicicum DSM1535
Brite
KEGG Orthology (KO) [BR:mfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfi03032]
    DSM1535_0670 (topA)
   03400 DNA repair and recombination proteins [BR:mfi03400]
    DSM1535_0670 (topA)
Enzymes [BR:mfi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     DSM1535_0670 (topA)
DNA replication proteins [BR:mfi03032]
 Prokaryotic type
  DNA Topoisomerases
   DSM1535_0670 (topA)
DNA repair and recombination proteins [BR:mfi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DSM1535_0670 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Auto_anti-p27
Other DBs
NCBI-ProteinID: CEA13031
UniProt: A0A090JUA7
Position
complement(669467..671623)
AA seq 718 aa
MHEVIVCEKPKASEKIAGAIPGKAVKKSYKKVPYYEIEKDGKKTTVLSAVGHLYSLSPLK
KEKGRMFEVGWVPLYEKDKSKRYVKNYIDAIKKFSKNADRFVHACDYDIEGTLIGFNALK
YACGEDSIDKAVRMKFSTLTKEDLLKAYNEPIDLDFNQVDSGEARHVLDFIFGVNISKDL
TDSVMKATSRYIQLSAGRVQTPTLAILVEREKEIQSFIPEPYWLIKAKVEGHIIADHKKG
KIFDKKVQEEILADCEGKDAQVSKISVKETPQLPPVPFDLGSLQSEAYGVFGFSPKKTQS
IAQNLYAEGYTSYPRTSSQKLPPSIGYKKILGQLKKNAAFRKQIDKLKEPIKPREGKKTD
EAHPAIHPTGLVPKGLGRDYQKLYELIVYRFISVFGENGILETMKTELDIGGQEFSFSRK
RMAKMGWREHYPYRKVENDEFPALKEGDLLGAQAYSEEKETKPPARYNQASLIRELEKRG
LGTKSTRANIISILYDRKYVEGKKIAVNQLGERLIDTLKKYSEKITSEELTREFETKLEG
IMKAEVKKEEIITEAKEEVSSILDDIDANKMKVGQELYSAYRESMIVGKCKCGGNLIMIN
SPKGGSFVGCTSYPDCKSTYSMPRGATVLKTKCEECGLPMISFGKPRQRACMDPKCGRDG
EEPLQNEVVGVCPDCGKDLIKRRGRYGEFVGCSGFPRCRYTRSLEEKQEQTTKKSEKT
NT seq 2157 nt   +upstreamnt  +downstreamnt
atgcacgaagttatagtatgcgagaaaccaaaggcatcggaaaaaatagcaggcgccata
ccgggtaaagcggtgaaaaagagttacaagaaggtgccctactatgaaatagagaaggat
gggaaaaaaaccacagtactttctgctgtaggtcatttatactccttatctcccttaaaa
aaggaaaaggggcggatgtttgaagtgggatgggtcccgctttatgagaaggataagagt
aaaaggtacgttaagaattacattgatgccattaaaaaattctctaaaaatgccgacaga
tttgtacatgcctgcgattacgacattgaaggtactttgattggtttcaatgcactaaag
tatgcttgtggtgaagacagcattgataaagccgtgcgtatgaagttctccaccctcacc
aaggaagacctgctgaaggcttataacgaacccattgaccttgatttcaatcaggtggac
agtggagaagcccgacatgttttggatttcatttttggagttaatatatccaaagacctc
acggattcagtaatgaaggccaccagccgttacatacagctttctgccgggcgagtgcaa
acccccaccctggccatattggtggaaagggagaaagaaatccagagcttcatcccggaa
ccctactggctcatcaaggccaaagtggaagggcacataattgccgatcataagaaggga
aaaatctttgataaaaaagttcaggaagagatcctggctgattgtgagggtaaagacgcc
caagtaagtaaaatcagtgttaaagaaaccccccagttacctccggttccctttgatctg
ggttctttgcagtctgaggcctacggggtttttggtttcagtcccaagaaaacccaatcc
attgcccagaacctgtacgctgaaggttacacctcctacccccgtacttcctcccagaaa
ctacctccaagtattggttataagaagatactgggtcagcttaaaaagaacgcagcattc
agaaaacagattgataaacttaaggaacccattaaaccccgtgaaggtaagaaaaccgac
gaagctcacccggcaatccaccccaccggactggttcccaaaggcctggggagagactac
caaaaactctacgaactcatcgtctaccgtttcatcagtgtttttggtgaaaacggtatc
ctggaaaccatgaaaaccgaactggatataggtggccaggaattcagtttcagccggaag
agaatggccaaaatgggatggagagaacattatccctaccgtaaggtggaaaatgatgaa
ttccccgcacttaaggaaggggaccttctgggtgcacaggcttactctgaagaaaaggaa
accaaacccccggccagatacaatcaggcttccctcatccgggaactggaaaaaagaggc
ctgggaaccaaatcaacccgtgccaacataatttccattttatacgaccgcaaatacgtg
gaaggtaaaaaaatagcggttaatcagctgggtgaacgccttattgatactctaaagaag
tattctgagaaaataaccagcgaagaactcacccgggaatttgaaaccaaattagagggc
ataatgaaggctgaagttaaaaaagaggagataataactgaagccaaggaagaagtaagt
tccatactggatgatatcgatgccaacaagatgaaagttgggcaggagctttactctgcc
taccgggagagcatgatcgtgggtaagtgcaagtgtggaggcaaccttatcatgatcaac
tcacctaaagggggtagctttgtgggatgcacctcttaccccgattgtaagtctacctac
tccatgccccgaggagccactgttcttaaaactaaatgtgaggaatgtggcctgccaatg
atttcatttggaaaaccacggcagagggcctgtatggatcctaagtgtggtcgtgatggt
gaagaacctctgcagaatgaagtggtgggtgtatgtcctgactgtggtaaagatctcatt
aaaagaaggggtcgctatggtgaatttgtaggatgtagtggcttcccacgatgccgttac
acccgttcactggaggaaaaacaggaacagaccactaaaaagtctgaaaaaacttaa

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