KEGG   Methanobacterium formicicum DSM1535: DSM1535_0873
Entry
DSM1535_0873      CDS       T03743                                 
Symbol
serS
Name
(GenBank) Type-2 serine-tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
mfi  Methanobacterium formicicum DSM1535
Pathway
mfi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mfi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DSM1535_0873 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mfi01007]
    DSM1535_0873 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mfi03016]
    DSM1535_0873 (serS)
Enzymes [BR:mfi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     DSM1535_0873 (serS)
Amino acid related enzymes [BR:mfi01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   DSM1535_0873 (serS)
Transfer RNA biogenesis [BR:mfi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    DSM1535_0873 (serS)
 Prokaryotic type
    DSM1535_0873 (serS)
SSDB
Motif
Pfam: tRNA_bind_4 tRNA-synt_2b DUF4836
Other DBs
NCBI-ProteinID: CEA13226
UniProt: A0A090JUS4
Position
860837..862387
AA seq 516 aa
MKFTLKGEVLFSKEADEALEDITKFIEEANQDLFLKGVAPDQRDDASQVVKWNLAGNNLH
LEIVSGRRGRAHDALLRMKKPLTQILGPQYHIGVRKITVQDYKIEIPSPEMIDVSQMPYV
ETAQFQNGKMVIEFEKLEEGDLRKHVVDRVVKHVLAETERIASAEDEDADDILTRQVTKI
EPGTVVGRSPKFPVFFEGDPTEEAAKQGWVKKFPGKGQWFYGPKFTALQRAIEDIFLEVL
VDKLEFFECTWPKLIPIPVMNKMRYLEGLPEGMYYCSAPRRDPELFKKFKNELLIKKEVP
IDRLKDGLKDPSYVLAPAQCEPFYEFFSHEVLDEKDLPIKLFDKSGWTYRWEAGGAKGLD
RVHEFQRTELVWLGTPQQVEEIRDATLEISQELANQMELEWYTEIGDDPFYLEGRKVEER
GIEFPDVPKYEMRLVVPGAEKGVAAVSANVHGTHFTEGFSIKETHNHTLWTGCTGIGTTR
WLFGFLAQKGFDEANWPEMVRERVRKVRTPEVLTWP
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaaatttacattaaaaggagaagttttattcagtaaagaggctgatgaagccctggaa
gacattacaaagttcattgaagaggccaatcaggaccttttcctgaaaggagtggcccct
gatcagagggatgatgcttcccaggtggttaaatggaatctggcaggaaacaatctccat
ctggaaatagtttccggtagaaggggaagagcacacgacgcacttctacggatgaaaaaa
ccactcacacaaattttaggccctcagtaccatattggtgtgcgtaaaataactgtgcaa
gattataagattgaaatcccatccccagaaatgattgatgtcagccagatgccctatgtg
gagactgctcaattccagaatggtaagatggtcattgaatttgaaaaactggaagaggga
gacctcagaaaacacgtggtggaccgggtggttaaacatgtcctggccgaaactgagaga
atagcttctgccgaagacgaagatgccgatgatattttaacccgccaggtcaccaaaatc
gagcctggtactgtagtgggacgcagccccaagtttcccgtgttctttgaaggagacccc
actgaagaagcagctaaacagggttgggtgaagaaattccccggtaaaggacagtggttc
tacggtcctaagttcactgccctgcagcgtgccattgaagacatatttctggaagttctg
gtggataaactggaatttttcgagtgtacgtggcctaaactcatacccatacccgtgatg
aacaagatgcgttacctggaaggactccctgagggaatgtattactgcagtgcacctcgt
cgtgaccctgagttgtttaaaaaattcaaaaacgagcttttaatcaaaaaggaagttcct
attgaccgtcttaaggatggtttgaaggatccttcctatgtcctggccccggcccagtgc
gaaccattctacgagttcttcagccacgaagtactggatgaaaaggacctgcccataaaa
ctctttgataagagcggctggacatatcgatgggaagctggtggagctaaaggcctggac
cgtgtccacgagttccagaggaccgaactggtctggttgggaaccccacagcaggtggaa
gagattcgtgacgctaccctggaaatatcccaggaactggccaaccagatggaactggaa
tggtacactgaaatcggcgatgaccccttctatctggaaggacgtaaagtggaagaacga
ggtatagaattccctgatgtgcccaaatacgagatgaggctggttgtgcccggtgccgag
aagggagtggctgcagtttctgccaatgtccacggaacccacttcactgaaggattctcc
attaaagaaacccataaccacaccctatggactggttgtactggtattggaaccaccagg
tggttgttcgggttcctggctcagaaaggttttgatgaagctaactggccagagatggtt
cgggaaagggtgagaaaggttcgtacccctgaagttttaacctggccttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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