KEGG   Methanoregula formicica: Metfor_0823
Entry
Metfor_0823       CDS       T02392                                 
Name
(GenBank) putative transcriptional regulator with HTH domain
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
mfo  Methanoregula formicica
Pathway
mfo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Metfor_0823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfo03400]
    Metfor_0823
Enzymes [BR:mfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Metfor_0823
DNA repair and recombination proteins [BR:mfo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Metfor_0823
SSDB
Motif
Pfam: SLFN_AlbA_2 HATPase_c_4 HTH_5 HTH_24 MarR_2 HTH_AsnC-type MarR HTH_IclR HTH_36 TrmB HTH_27 HTH_Crp_2 HTH_20 HTH_11 HTH_1 HTH_50 FaeA
Other DBs
NCBI-ProteinID: AGB01881
UniProt: L0HDK9
Position
811790..813082
AA seq 430 aa
MDLDTFLALIRGGESERVEFKKMPVKTLHHEIAAFANADGGYLIIGVGDNGSIVGTDIKK
ALEQVTGALQSIVPPPQVTTHKLSVNQRQVLIIEVGKSPSLCSIGGVVYIRIGTSARPLS
VQEILLLSSEQGTFTWDEAPSAADMKANPRYIDWFFKKIQESRGKHIDPKDRDRYLRSTG
AFRKDRLTNAGTLFFLNSTDAIPQAKIRMIGMENDEPAWSKEYEGPVWQTIEGAYTDLVR
EIKKIELIVGVRRVRIEEYPPRALREALINAVAHRNYVISADIRIFLYPGRIEIRNPGGL
MPGVDILDPEHIPRNPALSNLLYDTGFIERYGFGIRLIQDEVKRHSFCSVSFETTANRFR
VIFERKRDAQLDATDRQILDAIHNPSKSSEIACSLGMSKPAIIRRLKNLEELGLVKKEGS
GAHTRYTASS
NT seq 1293 nt   +upstreamnt  +downstreamnt
gtggatctcgacacatttcttgccctgatccggggtggagaatccgagcgggtcgaattc
aaaaaaatgcccgtaaaaacactccatcacgagattgcagcgtttgccaatgccgatggc
ggatacctcatcatcggtgtcggggataacggatctatcgtgggaaccgatataaaaaaa
gccctcgaacaggtaaccggggcgctccagtcaattgtccccccgccacaggttaccacc
cataaactgtccgtcaaccagcgacaggtcctgatcatagaggtcggcaagagtccatcc
ctttgttcgataggcggagtggtctatatcagaatcggaacgagcgcccggccgttgtcc
gttcaggaaattctcctgctctcatctgaacagggaaccttcacgtgggatgaagcgcca
tcagctgccgatatgaaagcaaacccccggtatattgactggttctttaagaaaattcag
gaatcccggggcaaacatatcgaccccaaagaccgggaccgctatcttcgtagcacgggt
gcattccgcaaggaccggcttaccaatgccgggactctttttttcctgaactccacggat
gcgatcccgcaggcaaaaatccgcatgatcggtatggaaaatgatgaacctgcctggagt
aaagaatatgaaggcccggtatggcagacgatcgagggcgcatacacggacctcgtacgg
gagatcaaaaaaatcgagctgatcgtaggggtacgacgggtccggattgaggaatatcca
cctcgtgcgctccgcgaagcgctcatcaatgcggttgcccatcgcaactatgtaatcagc
gcggatatccggatattcctttacccgggccggatagaaatcagaaatcccggcgggctg
atgccaggtgtggatatcctggatccggaacatatcccccgcaatccggcactttccaat
ctcctgtacgacacgggctttattgaacgctatggttttggcatccgcctcattcaggac
gaagtgaaacgccactcgttctgctcggtatcctttgagaccacggccaaccgcttccgg
gtgatctttgaaaggaaacgggatgcgcagctcgatgcaacagaccggcagatcctcgat
gcaatccataatccttcaaaaagcagcgagattgcttgttctctggggatgtccaaaccc
gcaattatccgcaggttaaaaaacctcgaagaactgggtcttgtcaaaaaagagggatcc
ggtgcccatacaaggtacactgcatcctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (33)   

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