KEGG   Methanoregula formicica: Metfor_1347
Entry
Metfor_1347       CDS       T02392                                 
Name
(GenBank) NMD protein affecting ribosome stability and mRNA decay
  KO
K07562  60S ribosomal export protein NMD3
Organism
mfo  Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:mfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mfo03009]
    Metfor_1347
Ribosome biogenesis [BR:mfo03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    Metfor_1347
SSDB
Motif
Pfam: NMD3 DZR_2 zf-ribbon_3 DapB_C zinc_ribbon_2 MazE_antitoxin DUF325 DUF6813
Other DBs
NCBI-ProteinID: AGB02387
UniProt: L0HCB7
Position
complement(1303529..1304572)
AA seq 347 aa
MSIRDNFCPKCGKPSDTAGLCRECRIGNTPWFTCDNRVKNVQCPSCGARKQVNTWIDNNR
ERDELAPDLARSAVHFHADVKKPSIDVVAVDNLTVNRSRASLVVRGTLYKSPVEGTCTVE
ILWEKEQCDRCNRISGSYYEGVVQVRAEGRSPSTFEVQMSASIAQQVEDNLQAGGERLSF
VSDMNEIPDGLDIIIGSQHIGLLIAQAIVAQLGGRYTTHPKLVGEKNGRQLYRITYSVRL
PRFQKHDIVFTGKRYYEVERVEAHHVRARDLSDGTAKSIRDEDIERIVGNSRNTMEALVA
FVDRSMVGIIDPVSSRSVEVARPKQAEVRAGDHVSIIRDGDSLIIVR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgagcatccgtgacaatttctgtcccaagtgcgggaaaccctccgataccgcaggactc
tgccgggaatgccggataggaaacacaccatggtttacctgcgataaccgggtcaagaac
gtccagtgtcccagttgcggagccaggaaacaggtgaacacgtggatcgataacaaccgg
gagagagatgaacttgcaccagatcttgcccgttcagcggtgcacttccatgcagacgta
aaaaaaccatccatcgatgttgtggcagtggacaacctgaccgtgaaccgttcccgtgcc
tcgctggttgtacgcgggacactctacaaatcaccggttgagggtacctgcacggtcgaa
attctctgggagaaggaacagtgcgaccggtgcaaccggatcagcggcagttactatgaa
ggggttgtccaggtccgggccgaggggcggtctcccagcacattcgaagtccagatgtcg
gcctccatcgcacagcaggtcgaggacaacctccaggctggcggggagcgcctctctttt
gtctcggacatgaacgagatcccggatggtctcgatatcatcatcggctcccagcatatc
ggtctcctgatcgcccaggctatcgttgcccagcttggcgggcgctatacaacgcacccg
aaactcgtgggtgagaagaatggcaggcagctgtaccggatcacctactccgtccgcctt
ccccggttccagaagcacgacatcgtctttaccgggaaacggtattatgaagtcgagcgt
gtcgaagcgcatcatgtgcgggcaagagacctttccgatggcacagcgaagtcgatccgc
gatgaggacattgagcggattgtcgggaactcgcggaacaccatggaggcgctcgtcgca
tttgtcgacagatccatggtcggcatcatcgatccggtctccagccggtccgtcgaagtt
gcccggccgaagcaggccgaagtccgggccggcgaccacgtcagtattatccgcgatggc
gacagtctcatcatagtcaggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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