KEGG   Methanoregula formicica: Metfor_2480
Entry
Metfor_2480       CDS       T02392                                 
Name
(GenBank) dsRNA-specific ribonuclease
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
mfo  Methanoregula formicica
Brite
KEGG Orthology (KO) [BR:mfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfo03019]
    Metfor_2480
   03009 Ribosome biogenesis [BR:mfo03009]
    Metfor_2480
   03036 Chromosome and associated proteins [BR:mfo03036]
    Metfor_2480
Enzymes [BR:mfo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Metfor_2480
Messenger RNA biogenesis [BR:mfo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Metfor_2480
Ribosome biogenesis [BR:mfo03009]
 Eukaryotic type
  90S particles
   RNase
    Metfor_2480
 Prokaryotic type
  rRNA processing factors
   Metfor_2480
Chromosome and associated proteins [BR:mfo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Metfor_2480
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3
Other DBs
NCBI-ProteinID: AGB03475
UniProt: L0HHF9
Position
complement(2429181..2429684)
AA seq 167 aa
MDPAKIKLLEDDLGHSFKDRRELFRALTHPTFAKEEKERKNDARDCPHQETYATLGDAIL
KAGFVLLLMELGVKTKGDITIIKSDLEKNLKLAEVGARLKLLENYLIYHHMGEGDQLKTG
ENKLYSDTVEALIGAIFIDTGCSFTETKVCISKIFGPELHRMVHTEK
NT seq 504 nt   +upstreamnt  +downstreamnt
atggacccggccaaaatcaaattgctcgaagatgatctcggacattccttcaaggataga
agagaattattccgggctttaacacacccgacattcgcgaaagaagaaaaagaacggaaa
aacgatgcccgagactgtcctcatcaagaaacctacgcaacattgggggatgcaatttta
aaggcgggttttgtcttactgttgatggagctgggtgtaaaaaccaagggggacatcacc
attatcaaatccgatctggaaaaaaatctgaaattagctgaagtcggagcccgtctgaaa
cttctcgaaaattatctgatttatcatcatatgggggaaggcgatcagctaaaaactgga
gaaaataaattgtattcggatactgtcgaagcattaatcggggcaatttttatcgatacg
ggttgttcttttactgaaacgaaggtctgtatctcgaaaatattcggtcctgaattacat
cggatggtacatacggaaaaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system