KEGG   Mesomycoplasma flocculare: MYF_03110
Entry
MYF_03110         CDS       T03538                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mfq  Mesomycoplasma flocculare
Pathway
mfq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mfq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYF_03110 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfq03400]
    MYF_03110 (uvrB)
DNA repair and recombination proteins [BR:mfq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYF_03110 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MYF_03110 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR Kinesin AAA_30 Helicase_C_2 SWI2_SNF2 AAA_22 AAA_7 Microtub_bd AAA_16 AAA_25 PseudoU_synth_2
Other DBs
NCBI-ProteinID: AJC50108
UniProt: A0A0A8E801
Position
715786..717774
AA seq 662 aa
MFVKKEFKKFKLNAKYKPNGDQPKAIKSLIEGIKSGKKSQILMGVTGSGKTFTMANVIAH
FNKPVIILSHNKTLASQLYTEFKEFFPENRVEFYISYFDFYRPEAYLPTKDVYLEKTSKT
NFDLETMRMAALNALMMRNDTIVIASVAAIYGTINPDEYQDNFLVLEINQEIKPSELALK
LARIMYENNSLEQKPGVFSLKGEILEIFPAWNDTFKIRIEFFGNLIEAINTIHPISKKII
KSYNSYIIYPASAYSVKKNIIDHAIKTIKVELEEQLEFFEKNNKLVEKQRLKERVNNDID
SLSEFGICSGIENYARHIDGRQKGEKPFCLLDYLPKDGLIFIDESHIMVAQIRGMYEGDR
SRKQNLVDFGFRLPSALDNRPLKLNEFEKYSQSKIYVSATPANYEIDKTNGEIVSQIIRP
TGLIDPEIIVEKTENQMEKIFQLLLKQKEKNERSLILTTTKRLAEEISKYLQEQKVQKVY
YLHSEMTTFERDEVIIKLRKGIYDAIVGINLLREGVDIPEVSLIFVLEADLPSFLRSKSS
LIQIIGRTARNDHGKVILFADKITDVIAKVIEDNKNKRRIQIEYNKKNNIIPKTIKKPIP
ESINPNSLNISKIFREKLNNKKEMESYIKILEKEMKIAADENRFEEAIQIRDLIAEIKLK
IE
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgtttgtgaaaaaagaatttaaaaaattcaaattaaatgcaaaatataaaccaaatggc
gatcaacctaaagcgattaaaagtttgattgaaggcattaaaagtggaaaaaaatcacag
attttaatgggggtaacaggatctggaaaaacttttacaatggcaaatgtaattgcccat
tttaacaaaccagtaataattttgtctcataataaaactttagcatcgcaattatatact
gaatttaaggaatttttcccggaaaatcgtgtcgaattttacatttcatactttgatttt
tatagaccagaagcatatttgccaacaaaagatgtttatttagaaaaaactagtaagaca
aattttgaccttgaaacaatgagaatggcggccctaaatgctttaatgatgcgaaatgat
acaatagttattgcctcagttgctgcaatttatggaacaattaatcccgatgaatatcaa
gataattttttggttttagagataaatcaagaaattaaaccaagcgaattagctctaaaa
cttgctagaatcatgtatgaaaataacagtttagaacaaaaacctggtgttttttctctt
aaaggtgaaattttagaaatttttcccgcctgaaatgatactttcaaaattagaattgaa
ttttttggaaacctgattgaagcgattaacaccatccacccaatttcaaaaaaaataata
aaatcctataattcttatataatttatcctgccagcgcttatagtgtcaaaaaaaatatc
attgaccacgcaatcaaaactatcaaggttgaacttgaagaacaacttgaatttttcgaa
aaaaataacaaactagtagaaaaacaaagactaaaagagcgagtaaataacgatattgac
tctcttagcgaatttggaatctgctcaggaattgaaaattatgcacgtcacattgacgga
cgtcaaaaaggagaaaaacctttttgtttgcttgattatctaccaaaagatggactgatt
tttatcgacgagtctcatattatggtcgcccaaattcgcggaatgtatgaaggtgatcgt
agtcgcaaacaaaatcttgtcgattttggttttcgccttccttcggcacttgataaccgt
cctttaaaactaaatgaatttgaaaaatattcacaatctaaaatttatgtttctgcgacc
cctgcaaattatgaaatagataaaaccaacggtgaaattgtatcacaaattattaggcca
acgggactaattgatcctgaaataatagttgaaaaaactgaaaaccaaatggagaaaatt
ttccaacttttactaaagcaaaaagaaaaaaatgaacgtagcctcattttaacaacaaca
aaaagacttgctgaagaaattagtaagtatttacaagaacaaaaggtacaaaaagtttat
tatttacactcagaaatgactacttttgaacgcgatgaggtaataatcaaactccgaaaa
ggaatttatgatgcaattgttggaattaacttactccgagaaggtgttgatattcctgaa
gtgtcgctaatttttgttcttgaagctgatttaccttcttttttaaggtcgaaatcctca
ctaatccaaattatcggacgaaccgcccgaaatgatcacggaaaagtgatactttttgca
gataaaattactgatgtgatcgcaaaagtgattgaagataataaaaacaaaaggagaatt
caaatagaatataataaaaaaaataacattatcccaaaaacaataaaaaaaccaattccg
gaaagcatcaatccaaacagtttaaacatcagcaagatttttcgtgaaaaactgaataac
aaaaaagaaatggaatcttatatcaaaatcttagaaaaggaaatgaaaattgctgctgat
gaaaatcgtttcgaagaagcaattcaaatccgtgatttaatcgcagaaattaagttaaaa
atagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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