KEGG T01175: MFS40622

Methanocaldococcus sp. FS406-22: MFS40622_0101

Entry

MFS40622_0101 CDS T01175

Definition

DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mfs Methanocaldococcus sp. FS406-22

Pathway

mfs03030	DNA replication
mfs03410	Base excision repair
mfs03420	Nucleotide excision repair
mfs03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mfs03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mfs03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mfs03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mfs03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

84214..85935

AA seq 573 aa
MLWKDVCEIFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYDER
ELGIGEKLLINAVTSIGINKDELLEKIKETGDIGLAIEQLKSKIKQASLFFQPLTVDEVY
ETLKRVGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDSLSV
YFNVPKEKLEKIYAITNDIGLLAEKLLMGDLESEDLKLKLFRPIKPMLAQLTPSIEEALL
EMGRAQFETKYDGARVQIHKDGNKVKIYSRRLEDVTNALPEIVEAVKNINVDKLIVEGEC
VAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDILYKDGVSFIDEEFEKRRK
VLEEIVGYENDWRTERERIEKELKSDKIIDISYKLVTNDANEAKEFYNWSLSIGHEGVMI
KNLKAPYTPGSRVRTMYKFKPTLESLDVVITKAKRGMGKRKDWYGSFEICVRDEEGNLYP
IGHVGTGLTEADLEMLKEEIDKIVIRDLGEEVEVEPKIVIEVAYEEIQKSDKYPCGYALR
FPRVVRFRFDKGVNDINTVEDVERIYEIQRGRK

NT seq 1722 nt +upstreamnt +downstreamnt
atgctttggaaagatgtatgtgagatatttaataaaattgaaaaaacaacaaaaaggtta
gaaaagagagactattttataaaattaattgacatggttaaagagaaagggaagccagag
gatttaaaaaagatttgttacatggctatagggagagtttatcccgaatacgatgagaga
gagttaggaattggagaaaagcttttaataaatgcagttacttccatagggattaataaa
gatgagttattagagaaaattaaagagacaggagacattgggttggctatagagcaatta
aaatcaaagattaaacaggcatctttgttttttcaaccattgactgttgatgaagtttat
gaaactttaaagagggttggagagatagaaggagaaggttctcaaaagaaaaagttgagg
ttaataagtagtctctttctaagagcctcaccaatagagtgtagatatttagcaaggtta
attttggaagatatgaggataggaatgaatgtcccaactatattagattccctttcagtt
tattttaatgttccaaaggaaaaattggaaaagatatatgcaataaccaatgatattgga
cttttagctgaaaaattattaatgggggatttagaaagtgaggatttaaaattaaaatta
tttagaccaataaaaccaatgttggctcagctaactccttcaattgaagaggcattactg
gagatgggtagggctcaatttgaaacaaagtatgatggagcaagagttcaaatacataag
gatggaaataaagttaagatttatagtaggagattagaggatgtcacaaatgcccttcca
gagattgttgaggcagtaaaaaatattaatgtagataagttaattgttgaaggagagtgt
gtagctatagataaacaaactggaaaaccaagaccatttcaagatatacttagaaggttt
agaagaaagtatgatatcggaaagatgatgaaagaaataaatttaagagtttatctattt
gatattctttataaagatggagtatcgtttatagatgaagagtttgaaaagagaaggaaa
gttttagaggaaattgttggttatgagaacgattggagaactgaaagggaaagaattgaa
aaggagcttaaatcagataaaataattgatatatcctataaattggttacaaacgatgct
aatgaagcaaaggagttttacaactggagtttatccattggacatgagggagttatgatt
aaaaatttaaaagctccttacaccccagggagtagggttagaactatgtataaatttaaa
ccaacgttggagagtttggatgttgttataacaaaggcaaaaagagggatggggaaaaga
aaggactggtatggttcatttgaaatatgtgttagagatgaggaaggcaatctctaccct
attggacatgtagggactggattaactgaggcagatttggagatgttaaaggaggaaatt
gataaaatagttattagagatttaggtgaagaggttgaggtagagccaaaaatagttatt
gaagttgcttatgaggagatacagaaatctgataaatatccttgcggttatgctttaaga
ttcccaagggttgtgaggtttaggtttgataaaggagttaatgatataaatactgtagaa
gatgttgaaagaatatacgaaattcagaggggaaggaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MFS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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