KEGG   Methanocaldococcus sp. FS406-22: MFS40622_0577
Entry
MFS40622_0577     CDS       T01175                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
mfs  Methanocaldococcus sp. FS406-22
Brite
KEGG Orthology (KO) [BR:mfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mfs03016]
    MFS40622_0577
Enzymes [BR:mfs01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     MFS40622_0577
Transfer RNA biogenesis [BR:mfs03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MFS40622_0577
 Prokaryotic type
    MFS40622_0577
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ADC69268
UniProt: D3S8A8
Position
complement(560834..561622)
AA seq 262 aa
MVITMHILKIAYDGRYSFQQQPHKQTVCDILLDTLEEIDFLAKKKIIYSGGRTDKGVSAL
GNFVIVELKKEPILSYINAKLKDKGIWVLGYREIDEIPKVKYRHYRYILPNINYNIDAIK
EGAKKMIGTHSFHNLSKRDKSKEKSPIRTIYDIKISENEFYLTIDIIGESFLWNMVRKIV
GALDLVGRGKKPVDWIGKLLDENHREGVPTFPPDGLILVEAKVDVDYIYDNYSIRKFKEY
WEEFFKLQVMKLGIAKTVLEFI
NT seq 789 nt   +upstreamnt  +downstreamnt
atggtgataactatgcacatattaaaaatagcttatgacggaagatactccttccaacaa
caaccacataaacagacagtttgcgatatcctcttagataccttagaagagattgatttt
ttagctaaaaagaaaataatctacagtggaggaaggacagataaaggagtctctgcctta
ggaaattttgttattgtagagctaaaaaaagaacccatcctctcatacataaatgcaaaa
ttaaaagataaaggcatctgggttttgggatatagagaaatagatgaaataccaaaagta
aaatacagacattataggtatatactgccaaatatcaactataacatagatgcaataaaa
gagggagcaaagaagatgattggcactcattccttccacaacctatcaaagagagataaa
tcaaaagaaaaaagtccaataagaaccatatacgatataaaaatctctgaaaatgagttt
tatttaacaatagacattattggagagagctttttatggaatatggttaggaagatagtt
ggagcattagatttagttggtagaggaaaaaagccagtagattggattggtaagctttta
gatgagaatcatagagaaggagttccaacatttccaccagatggattaatacttgttgag
gccaaggtagatgttgattatatatatgacaactactcaataagaaaatttaaagagtat
tgggaagagttctttaaattgcaagttatgaagttaggtatagcaaaaacagtattggag
tttatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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