KEGG   Corallococcus macrosporus HW-1: LILAB_17045
Entry
LILAB_17045       CDS       T01558                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
mfu  Corallococcus macrosporus HW-1
Pathway
mfu03030  DNA replication
mfu03430  Mismatch repair
mfu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LILAB_17045
   03430 Mismatch repair
    LILAB_17045
   03440 Homologous recombination
    LILAB_17045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfu03032]
    LILAB_17045
   03400 DNA repair and recombination proteins [BR:mfu03400]
    LILAB_17045
Enzymes [BR:mfu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LILAB_17045
DNA replication proteins [BR:mfu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LILAB_17045
DNA repair and recombination proteins [BR:mfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LILAB_17045
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF4795 DUF655
Other DBs
NCBI-ProteinID: AEI65312
UniProt: F8CMN3
Position
4017528..4021082
AA seq 1184 aa
MSFTHLHLHTLYSLLDGAIRMKDLIKTVKEKGMSSVAVTDHGNMFGAIDFYKKAKDAGIK
PILGMEAYVAGPKGREDRSEKVSHHLILVAKNAEGYANLRYLSSTAYMHGFYYHPRIDKK
VLAEHSKGLFALTACLGGEITSACFRGDMDHARRAAQEYKDIFEPGHFFLEVQSNGMPEQ
EKANENLFQLSRDLDIPLCATADAHYIKREDARAHELLMCIASGKTLADGKRMKHSTDKL
YVTSPTEMLEFFKDTPEAVHNTQRIAEQCNLELKLGKPMLPTFKVPDSHTPDSFMAELAY
EGLRERFKELAATVTYPIDREQYQARLALEIGVIQKMGFSGYFLIVQDFINWAKKMNIPV
GPGRGSGAGSLVAYALRITDVDPIPYNLLFERFLNPERVSMPDFDIDFCQDRRDEVIQYV
GRKYGEMNVGQIITFGSLKAKSVLRDVCRVFALPFSEGDRIAKLVPEVLNITLKEAIEME
PRLKEMMETPSNIGEVEGKPVTTKDVLEIALALEGLHRQPGMHAAGVVIADKPLWEFVPV
YQPPGEKTLITQFAKDEVEAAGLVKFDFLGLKTLTVIQHALDLVKRNHDKDIPRHEIPLN
DEKTWELMAKGDTAGVFQMESSGFTEMVVKLKPNCFEDVIAAGALYRPGPLDSGMVDVFI
NRKHGREKVSYPHPALEPVLKDTYGVIVYQEQVMQISQVLGGYTLGRADLLRRAMGKKKA
EVMQAERAGFLEGCAKNNVDLKVAGEIFDLMEKFAEYGFNKSHSAAYGLVTIHTAWLKAH
YPCEFMAALLSSEKDNTDKVVKHIGEARESGLEVLPPDVNQSDMEFGAVDGKIRFGLGAI
KGVGEGAIESILEARKDGHFKSLFDFCERVDSRKVNRKVMEALVKAGAFDFEKRSRRQIF
DTIEKAMNRGSASQKDKAAGQSSLFGMLAGPSSGGGGGLKDDYVEVEDWSEKERLSLEKE
AIGFYVSGHPLHQYDKELKRYARPITAVQRARKDDKLTVAGIVTVLRERPTKTGKRMAWV
TIEDLSGSIELVCFPGKDGTRNVMGKDGKWAKQGPKPGFEHWEHLLKSDDPILVSGTVQI
SQRDEDAPTPELIVDDIQSLKAVREKRTKRLELRVPADLLTEDRVAKLHELAKKYAGATP
VAVSVLFKGEGEALIGNTSIKVQVSDDLLLAVDRLFGMRVVEFG
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgtcctttacccacctccacctgcacaccctctactcgctcctcgatggggcgatccgg
atgaaggacctcatcaagacggtgaaggagaaggggatgagcagcgtcgccgtgacggac
cacggcaacatgttcggcgccatcgacttctacaagaaggcgaaggacgcgggcatcaag
ccgattctcggcatggaggcctacgtcgccgggccgaaggggcgcgaggaccgctccgag
aaggtctcccaccacctcatcctggtggcgaagaacgcggagggctacgccaacctgcgc
tacctctcctccaccgcgtacatgcacgggttctactaccacccgcgcatcgacaagaag
gtgctcgcagagcacagcaagggcctgttcgcgctcaccgcctgcctgggtggtgaaatc
accagcgcctgcttccgcggcgacatggaccacgcccgccgcgcggcgcaggagtacaag
gacatcttcgagcccgggcacttcttcctggaggtgcagtccaacgggatgccggagcag
gagaaggcgaacgagaacctcttccagctctcgcgcgacctggacatcccgctgtgcgcc
accgcggacgcgcactacatcaagcgcgaggacgcgcgggcgcacgagctgctcatgtgc
atcgccagcggcaagacgctggcggacggcaagcgcatgaagcactccacggacaagctc
tacgtcaccagccccacggagatgctggagttcttcaaggacacgcccgaggcggtccac
aacacccagcgcatcgcggagcagtgcaacctggagctgaagctgggcaagcccatgctg
cccaccttcaaggtgcccgacagccacacgccggacagcttcatggcggaactggcctat
gaaggcctgcgcgagcgcttcaaggaactggccgccaccgtcacgtaccccatcgaccgc
gagcagtaccaggcgcggctggcgctggagattggcgtcatccagaagatggggttcagc
ggctacttcctcatcgtccaggacttcatcaactgggcgaagaagatgaacatcccggtg
ggcccgggccgtggctccggcgccggcagcctggtggcctacgcgctgcgcatcaccgac
gtggaccccatcccgtacaacctcctcttcgagcgcttcctgaacccggaacgcgtgtcg
atgcccgacttcgatatcgacttctgccaggaccgccgggacgaggtcatccagtacgtc
ggccgcaagtacggcgagatgaacgtggggcagatcatcaccttcggctcgctgaaggcg
aagagcgtgctgcgcgacgtgtgccgcgtgttcgcgctgcccttcagtgaaggtgaccgc
atcgcgaagctggtgccggaggtgctcaacatcaccttgaaggaggccatcgagatggag
cctcgcctcaaggagatgatggagacgccctccaacatcggcgaggtggagggcaagccc
gtcaccaccaaggacgtgctggaaatcgcgctcgcgctggagggcctgcaccgccagccc
ggcatgcacgccgccggcgtggtgatcgccgacaagccgctgtgggagttcgtgcccgtc
taccagccgccgggtgagaagacgctcatcacccagttcgccaaggacgaggtggaggcg
gccggcctggtgaagttcgacttcctcgggctgaagacgctcacggtgattcagcacgcg
ctggacctggtgaagcgcaaccacgacaaggacatcccgcggcacgagattccgctcaac
gacgagaagacctgggagttgatggccaagggcgacacggccggcgtcttccagatggag
tccagcggcttcacggaaatggtcgtgaagctcaagccgaactgcttcgaagacgtcatc
gccgccggcgcgctctaccgcccgggtccgctggactccggcatggtggacgtcttcatc
aaccgcaagcacggccgggagaaggtgtcgtacccgcaccccgcgctggagccggtgctc
aaggacacctacggcgtcatcgtgtaccaggagcaggtgatgcagatttcgcaggtcctg
ggtggctacaccctgggccgcgcggacctgcttcgccgcgccatgggcaagaagaaggcc
gaggtcatgcaggccgagcgggccggcttcctcgagggctgcgcgaagaacaacgtcgac
ctcaaggtcgccggtgaaatcttcgacctgatggagaagttcgccgagtacggcttcaac
aagagccactcggcggcctacggcctggtcaccatccacacggcctggctgaaggcgcac
tacccctgcgagttcatggcggcccttctctccagcgagaaggacaacacggacaaggtg
gtgaagcacatcggcgaggcgcgcgagtcgggcctcgaggtgctgccgccggacgtgaac
cagtccgacatggagttcggcgcggtggacgggaagattcgcttcggcctgggcgccatc
aagggcgtgggcgagggcgccatcgagtccatcctggaggcgcgcaaggacggccacttc
aagagcctgttcgacttctgcgagcgcgtggacagccgcaaggtgaaccggaaggtgatg
gaagcgctggtgaaggcgggcgccttcgacttcgagaagcgctcgcgccggcagatcttc
gacaccatcgagaaggcgatgaaccgcggctcggccagccagaaggacaaggcggccggg
cagagctcgctgttcgggatgctggccggtccgtcctcgggtggcggcggcgggctgaag
gacgactacgtcgaggtggaggactggtcggagaaggagcggctgtcgctggagaaggag
gccatcggcttctacgtgtccggccacccgctgcaccagtacgacaaggagctgaagcgc
tacgcgcggccgattacggcggtgcagcgcgcgcgcaaggacgacaagctcacggtggcg
ggcatcgtcacggtgctgcgcgagcggcccacgaagacgggcaagcgcatggcgtgggtg
acgattgaagacttgtccggctccatcgagctggtgtgcttcccgggcaaggacggcacg
cgcaacgtgatgggcaaggacggcaagtgggcgaagcagggccccaagccgggcttcgag
cactgggagcacctgctcaagtcggacgaccccatcctggtgtccggcacggtgcagatc
agccagcgtgacgaggacgcgcccacgccggagctcatcgtcgacgacatccagagcctc
aaggcggtgcgcgagaagcgcaccaagcgcctggagctgcgcgtgccggcggacctcctg
acggaggaccgggtggcgaagctgcacgagctggcgaagaagtacgccggcgccacgccc
gtggcggtgagcgtgctcttcaagggcgagggcgaggcgctcatcggcaacacgtccatc
aaggtgcaggtgagtgacgacctgctcctggcggtggaccgcctgttcggcatgcgggtg
gtggagttcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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