KEGG   Mycoplasmopsis gallinacea: VO56_00785
Entry
VO56_00785        CDS       T03898                                 
Name
(GenBank) hypothetical protein
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mgb  Mycoplasmopsis gallinacea
Pathway
mgb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VO56_00785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgb03019]
    VO56_00785
   03016 Transfer RNA biogenesis [BR:mgb03016]
    VO56_00785
Enzymes [BR:mgb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     VO56_00785
Messenger RNA biogenesis [BR:mgb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VO56_00785
Transfer RNA biogenesis [BR:mgb03016]
 Prokaryotic type
  tRNA degradation factors
   VO56_00785
SSDB
Motif
Pfam: RNB CSD2 S1 OB_RNB RNase_II_C_S1 SNARE_assoc Rep_fac_C
Other DBs
NCBI-ProteinID: AKA49811
UniProt: A0A0D5ZJ37
Position
complement(278903..281137)
AA seq 744 aa
MNIKEKVLKYLKSCKNSSFVKLSRDLKIPFSKNKELSDILNELQKEYKVFRDNKDNYYAP
ELIETVVGLLNVSNKGTFGFVDYNINEETGEKDSVFVKNFNFKTAINGDLVQVNVYKNPR
DENDQNNGIVTEVLERNTHEIVGFIKKTEKSNTVFFQPIDAKLKNNKFIILPSNVSFKVN
DLVATSVVDYKERYIEIKVDKVITNDADPMVFVKAFIEQVKVPEAFPEELKNETDKIPQN
IDLEDQSNRVDLTDQMIVTIDGDDTKDFDDAITVKKLPNGNYFLGVYIADVSYYVQEHTE
INKEALKRGTSIYLVDRVIPMLPFELSNGICSLNPNEKRFVMAAEMEIDKFGNNVNCKIF
QGIIKSKFRLTYKQVDKYFKKNTILEEYSNQQEVSELKKMLNEAKELSLILHKFKENQGY
IDFEIDEPKIKLNQDGSVKEIVIHKRGFSEVLIEDFMVRANETVAKYLFDNKLPLLYRIH
EIPDFEKINALENSLKAIGLTLPDIDLSDINPQLFSKFAEQIKEQRNDDFVKLSFLRTMQ
KAIYSTDNVGHFGLASNFYCHFTSPIRRYPDLIVHRTIRKYLINNHSRDDIDSYTSEIES
YGVLNTKSEQKAVQIERDVNDLKFAEYLKDKIGQTFDAQIQSILNFGFFISFEFKASGLV
HKTSFFDGEYEANETLTSAKVGQNKFNVGDWVKVVVVGVDLVEGKVDCVLESQYPKYLEN
QSNLKENLRFKHTGAKSGKNKKTS
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgaatataaaagaaaaagttttaaagtatttaaaaagttgcaaaaatagttcatttgtg
aagctaagccgtgatttaaaaattccatttagcaaaaacaaagaacttagcgatatttta
aatgaattacaaaaagaatacaaagtctttagggacaataaagataattattatgcccct
gaattaattgaaactgttgttggtcttttaaatgtttcaaataaaggaacctttggattt
gttgattataatattaatgaagaaacaggcgaaaaagatagtgtttttgttaaaaacttt
aatttcaaaaccgcaattaatggagatttagttcaagttaatgtttataaaaacccaaga
gatgaaaatgaccaaaataatggaattgtaactgaagttttagaaagaaacactcacgaa
attgttgggtttattaaaaaaacagaaaaaagcaacactgttttctttcaaccaattgat
gctaagttaaaaaataataaatttattatccttccttccaatgtttcatttaaagttaat
gatttagttgctactagcgttgttgattataaagagcgctacatcgaaatcaaagttgat
aaagttattaccaatgatgctgatccaatggtctttgttaaagcttttattgagcaagtc
aaagttcctgaagctttccctgaagaattaaaaaatgaaactgacaaaataccacaaaat
attgatttagaagatcaaagtaaccgggtagatttaactgatcaaatgattgttacaatt
gacggtgatgatactaaagattttgatgatgctattactgttaaaaaacttcctaatgga
aattactttttaggagtttatattgctgatgtttcttactatgtgcaagaacatactgaa
attaacaaagaagcccttaaacgcggaaccagcatctatcttgtagatcgggtaattcca
atgcttccttttgaactttccaacggaatttgttcgcttaacccaaatgaaaaaagattt
gtaatggctgctgaaatggaaattgataaatttggaaataatgttaattgcaagatattt
caaggaattatcaaaagtaaatttagacttacatataaacaagtagataagtattttaaa
aaaaatactatcttagaagaatattcaaaccagcaagaagtttcagaacttaaaaagatg
cttaacgaagctaaagaacttagtttaattttgcataaatttaaggaaaatcaaggttat
attgattttgaaattgatgagccaaaaattaagctgaatcaagatggaagtgttaaagaa
attgtgattcataagcgtggattttcagaagttttaattgaagatttcatggttagagct
aatgaaactgtagctaaatatctttttgataataaacttccacttttatatagaattcat
gaaattcctgattttgaaaaaattaatgccttagaaaactcattaaaagcaattggactt
actcttcctgatattgatttaagtgatattaatccacaacttttctctaaatttgctgag
caaattaaagaacaaagaaatgatgattttgttaaattaagctttttaagaacaatgcaa
aaagcaatttattcaactgataatgttgggcactttgggcttgcttcaaatttttattgc
cattttactagcccaattcgtcgttatccagatttaattgtgcatcgcactattagaaaa
tatttaatcaacaatcactcaagagatgatattgattcatacacaagtgaaatcgaaagt
tatggagtgcttaataccaaaagcgagcaaaaagcagtgcaaattgaaagagatgtaaat
gatttaaaatttgctgagtatcttaaagataaaattggacaaacttttgatgctcaaatt
caaagtattttgaattttggattcttcattagttttgaatttaaagcaagcggacttgtt
cataaaacttcattttttgatggcgaatacgaagctaacgaaacacttacaagtgctaaa
gtaggtcaaaataaatttaacgttggtgactgagttaaagttgtagttgttggtgttgat
cttgttgaggggaaagttgattgtgtgttagagagtcaatatccaaaatacttagaaaac
caatcaaacttaaaggaaaatttaagatttaagcacactggagctaaaagtggaaaaaac
aagaaaactagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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