KEGG T00498: Mflv

Mycobacterium gilvum PYR-GCK: Mflv_1828

Entry

Mflv_1828 CDS T00498

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mgi Mycobacterium gilvum PYR-GCK

Pathway

mgi03410	Base excision repair
mgi03420	Nucleotide excision repair
mgi03430	Mismatch repair
mgi03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mgi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mgi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mgi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mgi03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1897531..1899831

AA seq 766 aa
MVDRYDRVKLTNPDKVLYPASGTTKAQVFEYYVNVAEGMLPHIAGRAVTRKRWPNGVEES
SFFEKQLASSAPDWLDRGTIAHKSGTTTYPVIDTVEGLAWIAQQAALEVHVPQWRFTRGG
QSGAADGGDGKPGPATRIVFDLDPGEGVTFRQLCEVAHEVRELITDIGLTTFPLTSGSKG
LHLYVPLEDPISSRGASVLAKRVAQQLEQSMPKRVTATMTKSLRDGKVFLDWSQNNGNKT
TIAPYSLRGRERPTVAAPRTWDEIEDPDLRHLTFDEVLDRLERDGDLLADLDPPLPATDK
LTRYRSMRDRTKTPEPVPAEPPETGANDKFVIQEHHARRLHYDFRLERDGVLVSWAVPKN
LPDTPSVNHLAVHTEDHPMDYIDFAGEIPKGEYGGGEVHIWDTGTYETEKFRDNPPDGPA
KGGEVIVTLHGQKIEGRYALIQTDGKNWLAHRMKDQQKPTAADLAPMLTTEGSVERLTRG
QWAFEGKWDGYRLLVDADHGKLTLRSRRGRDVTAEYPQLKALAADLADHHVILDGEAVAL
DEDGVPSFGEMQNRARSTRVEFWAFDILFLDGRLLTKATYTDRRKLLEALAEGGGLIVPP
ALEGDGPEALEYARSQRWEGVIAKKRDSTYQPGRRSSAWIKDKIWNTQEVVIGGWRQGEG
GRTSGIGALVLGVPDDDGLHFVGRVGTGFTDKQLASLKKTLEPLRTDESPFAAELPKQDA
KGVTFVRPELVGEVRYSERTSDGRLRQASWRGLRDDKVPEDVRWEG

NT seq 2301 nt +upstreamnt +downstreamnt
gtggtggaccgttatgaccgggtgaagctgaccaacccggacaaggtgctgtatccggcc
agcggcaccaccaaagcgcaggtcttcgagtactacgtgaatgtcgccgagggcatgctg
ccacacatcgccggacgtgccgtgacacgtaagcggtggccgaacggcgtcgaggagtcg
tcgttcttcgagaagcagctcgcgtcgtcggcgccggactggctggaccgcggcaccatc
gcgcacaagtccggcaccaccacctatccggtcatcgacaccgtcgaggggctggcctgg
atcgcgcagcaggcggcgctggaggtgcacgttccgcagtggcggttcacccggggcggg
cagagtggggcggctgacggcggggacggaaagccggggccggcgacgcggatcgtgttc
gacctcgaccccggcgagggtgtcacgttccgtcagctctgcgaggtcgcccacgaggtg
cgcgagctcatcaccgacatcgggctcacgacgttcccgctgaccagcggaagcaagggc
cttcatctgtacgtcccgctggaggacccgatcagttcccgcggggcgtcggtgctcgcc
aagcgcgtggcgcaacagctcgagcagagcatgcccaagcgggtcaccgcgacgatgacc
aagagcctgcgcgacggcaaggtgtttttggactggagtcagaacaacggcaacaagacc
acgatcgcgccgtactcgcttcgtggacgggaacgtccgacggtcgccgctccccggacg
tgggatgagatcgaggacccggacctgcgtcacctgaccttcgacgaggtgctcgaccgg
ttggagcgcgacggtgacctgctcgccgacctcgacccgccattgccggccaccgacaag
ctcacccgttaccgcagcatgcgagaccgcacgaagacgccggagccggtgcccgctgag
ccgcccgagaccggcgcgaacgacaagttcgtgatccaggagcaccatgcgcggcggttg
cactacgacttccggctggagcgtgacggtgtcctggtgagttgggcggtaccgaagaac
cttcccgacaccccgtcggtcaatcaccttgcggtgcacaccgaagaccatccgatggac
tacatcgacttcgccggcgagatcccgaaaggggagtacggcggcggcgaggtccacatc
tgggataccggcacgtacgagacggagaagttccgcgacaacccgcccgatggaccggcc
aagggcggcgaggtgatcgtcacgctgcacggtcagaagatcgagggccggtacgcgttg
atccagaccgacggcaagaactggctcgcgcaccggatgaaggaccagcagaagccgacc
gcggccgacctggcgccgatgctgaccaccgagggatcggtggagcgactcaccaggggc
caatgggcgttcgaggggaaatgggacggctatcggctcctggtcgacgccgaccacggc
aagctgacgctgcggtctcggcggggccgtgacgtcaccgccgaatacccgcagttgaag
gcgctcgccgccgacctggccgaccatcacgtgattctcgacggggaggcggtggcgctc
gacgaggacggggttccgagtttcggtgagatgcagaaccgggcccggtcgacgcgggtc
gagttctgggcgttcgacatcctgttcctcgacggccggttgctgaccaaggccacgtat
accgatcggcgaaagctgttggaggcgttggccgaaggcggaggattgatcgttccaccc
gcccttgagggggacgggcccgaggcgctggagtacgccagatctcagcggtgggagggc
gtgatcgccaaaaaacgggactccacgtatcagccgggccggcggtcctcggcctggatc
aaggacaagatctggaacacccaggaagtggtgatcggcgggtggcgccagggtgaaggt
gggcgcacgagcgggatcggggcgctcgtgctcggagtgcccgacgacgacggactgcac
ttcgtcggacgtgtcggcaccgggttcaccgacaagcagctggcgtcgttgaagaagact
ctggagccgctgcgcaccgacgaatcacccttcgcggcagagcttcccaagcaggacgcc
aagggggtgacgttcgtgcggccggaactggtgggggaggtgcgctacagcgagcgcacg
tccgacggtcgtctgcggcaggcgagctggcgcggtctgcgcgacgacaaggttcccgag
gatgttcggtgggaggggtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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