KEGG   Magnetococcus marinus: Mmc1_1621Help
Entry
Mmc1_1621         CDS       T00427                                 

Definition
bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mgm  Magnetococcus marinus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mgm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Mmc1_1621
Enzymes [BR:mgm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Mmc1_1621
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mmc1_1621
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2007535..2008362
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETTRRGIEPALVGKRLCGVVVRQPQLRWPIPVKTLEKELVGQVIQQVARRAKY
LLWRCPQGTLLVHLGMSGSLRIVPEHTPPAKHDHVDWVMEGGQMVRLHDPRRFGAVVWIP
VTSPEEEHPLLAKLGPEPLHRSLNGRYLHQGSRGRQLAVKNYIMDQSVVVGVGNIYASEA
LFRAGIAPAQAAGKVGLGRYRALACAIKAVLGDSIEQGGTTLRDFIGSDGKPGYFVQSLN
VYGRAGKACPKCGTTIEKQVLGQRSSYYCPQCQRA
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattaccagaggttgaaaccacccgccggggtattgaacccgccctggtgggt
aaacgcctgtgtggcgtggtggtgcgtcagccccaactgcgctggcccataccggttaaa
accctggaaaaagagttggtggggcaggtgatccaacaagtggcccggcgggctaaatat
cttttatggcgctgcccgcaaggaaccttgctggttcacttgggcatgtctggttctttg
cgtattgtgcccgagcataccccccccgccaaacatgaccatgtggattgggtgatggaa
ggcgggcagatggtgcgcttgcatgatccccggcgttttggcgcggtagtgtggataccg
gtaaccagcccagaagaagaacatcccctgctggccaaattggggccagaacccctgcat
cgcagcctcaatggtcgttacctccaccagggttcccgtgggcgtcaactggcagtaaaa
aattatattatggatcaaagcgtggtggtgggggtcggcaacatctacgccagcgaggcg
ctgtttcgcgccggcattgctcccgctcaagccgcaggtaaagtgggcttaggacgctac
cgggcgctggcctgtgccattaaagcggtgttgggggattcaatcgaacagggtgggacc
acgctgcgggattttattggcagtgatggcaaaccgggctactttgtacaatccctcaat
gtctatgggcgtgcgggtaaagcgtgcccaaaatgtggcaccaccatagaaaaacaggta
ctggggcagcgctccagctattattgcccccaatgccagcgggcctag

DBGET integrated database retrieval system