KEGG   Mycolicibacterium goodii: AFA91_32055
Entry
AFA91_32055       CDS       T04008                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mgo  Mycolicibacterium goodii
Pathway
mgo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AFA91_32055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgo03021]
    AFA91_32055
   03400 DNA repair and recombination proteins [BR:mgo03400]
    AFA91_32055
Enzymes [BR:mgo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AFA91_32055
Transcription machinery [BR:mgo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AFA91_32055
DNA repair and recombination proteins [BR:mgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AFA91_32055
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 Peptidase_M23
Other DBs
NCBI-ProteinID: AKS35788
UniProt: A0A0K0XEF9
Position
complement(6842836..6846351)
AA seq 1171 aa
MLEGCILAVSSQSKSNAITNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLVGSDR
WRQAAIDRGEENPVGGLEEVLAELSPIEDFSGSMSLSFSDPRFDEVKASVDECKDKDMTY
AAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDE
TIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIV
ERFGFSEIMMGTLEKDTTSGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLA
RVGRYKVNKKLGLNAGKPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVEVDD
IDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKE
FFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVTDQIDYLTADEEDRHVVAQANSPTD
ADGRFTEERVMVRKKGGEVEFVPAAQVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGA
NMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKTGVIEEVSADYITVMADDGTRQS
YRLRKFARSNHGTCANQRPIVDAGQRVEAGQVIADGPCTQNGEMALGKNLLVAIMPWEGH
NYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGI
VRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIG
IRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPD
GTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIDVAGAEGVPDWASKLPEELYSAP
SDSIVATPVFDGAQEAELAGLLGSTLPNRDGEVMVNADGKATLFDGRSGEPFPYPVTVGY
MYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQE
LLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEM
RDGDDEDLERAAANLGINLSRNESASVEDLA
NT seq 3516 nt   +upstreamnt  +downstreamnt
gtgctggaaggatgcatcttggcagtctctagccagagcaagtcgaacgctatcaccaat
aactccgtcccaggggcaccgaaccgagtttcatttgccaagctccgtgaaccgcttgag
gttccggggctgctcgacgttcagacggattccttcgagtggctggtcgggtccgaccgg
tggcgccaggccgccatcgaccgcggcgaggagaaccccgtaggcggcctcgaagaggtc
ctcgccgagctttcgccgatcgaggatttctcgggctcgatgtcgctgtccttctcggat
ccgcgcttcgacgaggtcaaggcctctgtcgacgagtgcaaagacaaggacatgacgtac
gcggccccgctgttcgtcacggccgagttcatcaacaacaacaccggcgagatcaagagc
cagacggtcttcatgggcgacttcccgatgatgaccgagaagggcaccttcatcatcaac
ggcaccgagcgcgtcgtcgtgtcgcagctcgtccgttcgcccggtgtgtacttcgacgag
accatcgacaagtccaccgagaagacgctgcacagcgtcaaggtgatccccggtcgcggc
gcgtggcttgagttcgacgtcgacaagcgcgacaccgtcggcgtgcgcatcgaccgcaag
cgccgccagccggtcaccgtgctgctcaaggcgctcggctggaccaacgagcagatcgtg
gagcgcttcggcttctccgagatcatgatgggcacgctggagaaggacacgacctccggc
accgacgaggccctgctcgacatctaccgcaagctgcgtccgggcgagccgccgaccaag
gagtccgcgcagaccctgctggagaacctgttcttcaaggagaagcgctacgacctggcc
cgcgtgggccgctacaaggtcaacaagaagctgggcctcaacgcaggcaagccgatcacc
agctcgacgctgaccgaagaggacgtcgtcgcgaccatcgagtacctggtgcgtctgcac
gagggccagaccacgatgaccgtccccggcggcgtcgaggttccggtcgaggtggacgac
atcgaccacttcggcaaccgtcgtctgcgcaccgtcggtgagctgatccagaaccagatc
cgggtgggcctgtcccgcatggagcgggtcgtgcgtgagcgcatgaccacgcaggacgtc
gaggcgatcacgccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggag
ttcttcggcaccagccagctgtcgcagttcatggaccagaacaacccgctgtcgggtctg
acccacaagcgtcgtctctcggcgctgggccccggcggtctgtcccgtgagcgcgccggc
ctcgaggtccgcgacgtgcacccgtcgcactacggccggatgtgcccgatcgagacccct
gagggtccgaacatcggtctgatcggctcgctgtcggtgtacgcccgggtgaacccgttc
ggcttcatcgagacgccgtaccgcaaggtcgtcgacggcgtggtcaccgaccagatcgac
tacctcaccgccgacgaggaggaccgccacgtcgtggcgcaggccaactcgccgaccgat
gcggacggccgcttcaccgaagagcgcgtcatggtccgcaagaagggtggcgaggtcgag
ttcgtccccgccgcgcaggtggactacatggacgtgtcgccgcgccagatggtgtcggtg
gccacggccatgatcccgttcctcgagcacgacgacgccaaccgcgccctgatgggtgcc
aacatgcagcgccaggcggttccgctggtgcgcagcgaggcaccgctggtgggcaccggt
atggagctgcgtgccgcgatcgacgccggtgacgtcgtcgtcgccgacaagaccggcgtc
atcgaagaggtcagcgccgactacatcaccgtcatggccgacgacggcacgcgccagtcg
taccggctgcgcaagttcgcccggtccaaccacggcacgtgcgccaaccagcgtccgatc
gtggacgccggccagcgtgtcgaggcaggccaggtcatcgccgacggcccctgcacccag
aacggtgagatggccctcggcaagaacctgctcgtggcgatcatgccgtgggaaggccac
aactacgaggacgcgatcatcctctccaaccgcctggtcgaagaggacgtgctcacctcg
atccacatcgaagagcacgagatcgatgcccgcgacaccaagctgggcgccgaggagatc
acccgggacatcccgaacgtctccgacgaggtgctggccgacctcgacgagcgcggcatc
gtccgcatcggcgccgaggtccgtgacggcgacatcctggtcggcaaggtcaccccgaag
ggggagaccgagctgaccccggaggagcggctgctgcgcgcgatcttcggtgagaaggcg
cgcgaggtccgcgacacgtcgctgaaggtgccgcacggtgagtccggcaaggtcatcggc
atccgcgtgttctcccgcgaggacgacgacgaactgcctgccggcgtcaacgagctggtc
cgcgtgtacgtcgcacagaagcgcaagatctccgacggcgacaagctcgccggacgccac
ggcaacaagggcgtcatcggcaagatcctgcccgtcgaggacatgccgttcctgcccgac
ggcaccccggtcgacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatcggc
cagatcctggagacccacctcgggtgggtggccaaggccggctggaacatcgacgtggcc
ggcgccgagggtgtgccggactgggcgtccaagctgcccgaggagctgtactcggctccc
tcggacagcatcgtggcgaccccggtgttcgacggtgcccaggaggccgagctcgcgggt
ctgctcgggtcgacgctgccgaaccgcgacggcgaggtcatggtcaacgccgacggcaag
gcgacgctgttcgacggccgcagtggtgaaccgttcccgtacccggtgacggtgggctac
atgtacatcctgaagctgcaccacctggtggacgacaagatccacgcgcgttcgaccggt
ccgtactcgatgatcacccagcagccgctcggtggtaaggcgcagttcggtggtcagcgc
ttcggtgagatggaatgttgggccatgcaggcctacggcgctgcctacaccctgcaggag
ctgctgaccatcaagtccgacgacaccgtgggccgcgtcaaggtgtacgaggcgatcgtc
aagggcgagaacatcccggaacccggtatccccgagtcgttcaaggtgttgctcaaggag
ctgcagtcgctgtgcctcaacgtcgaggtgctctccagcgacggcgcagcgatcgagatg
cgcgacggtgacgacgaggacctggagcgcgctgccgcgaacctgggaatcaacctgtcc
cgcaacgagtccgcgtctgtcgaggaccttgcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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