KEGG   Meleagris gallopavo (turkey): 100541563Help
Entry
100541563         CDS       T01523                                 

Gene name
LAMC1
Definition
(RefSeq) laminin subunit gamma 1
  KO
K05635  
laminin, gamma 1
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:mgp00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100541563 (LAMC1)
 Cellular Processes
  Cellular community - eukaryotes
   04510 Focal adhesion
    100541563 (LAMC1)
Cell adhesion molecules and their ligands [BR:mgp04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
  Others
   LU; Lutheran blood group glycoprotein [KO:K06578]
    Laminin-10 Extracellular matrix (ECM) components
     100541563 (LAMC1)
    Laminin-11 Extracellular matrix (ECM) components
     100541563 (LAMC1)
   MCAM, CD146; melanoma cell adhesion molecule [KO:K06534]
    Laminin-8 Extracellular matrix (ECM) components
     100541563 (LAMC1)
   CXADR, CAR; coxsackievirus and adenovirus receptor [KO:K06788]
    Laminin-1 Extracellular matrix (ECM) components
     100541563 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100541563 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-3
      100541563 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100541563 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
 7. Others
  DAG1; dystroglycan 1 [KO:K06265]
   Laminin-1 Extracellular matrix (ECM) components
    100541563 (LAMC1)
   Laminin-2 Extracellular matrix (ECM) components
    100541563 (LAMC1)
  APP; amyloid beta A4 protein [KO:K04520]
   Laminin-1 Extracellular matrix (ECM) components
    100541563 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Ensembl: 
Position
10
AA seq 1488 aa AA seqDB search
IFVVSCFSLSHSFVPSPAGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGS
CESTYNKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQ
EWVTATDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIRNELG
KLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRST
GHGGHCSGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPG
VMGEKCDRCQPGFHSLSEAGCRPCSCNPAGSTGECNMETGRCTCKDNVEGFHCERCKPGF
FHLDPSNPRGCTPCFCFGHSSVCANAVGYSVYSITSSFQFGEDEWHAEQRDGSQVPVQWS
PETQDISVISDSYFPIYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAG
LRVSVPLIAQGNSYPSESPLTYTFRLHEAADYPWRPALSAFDFQKLLHNLTAIKIRGTYS
ERSAGHLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRETPGLGPYSPC
VPCSCNGHSETCDPETGVCDCRDNTAGSQCEKCSDGYYGDATAGTALDCQPCPCPGGSSC
AVVPRTREVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGN
CNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACHCNPYGTVNQQTSCNQV
TGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVT
GQRCDRCEANHFGFGPEGCKPCDCDPEGSRALQCREDGRCECKEGFVGNRCDQCEENYFY
NRSWPGCQECPACYRLVKDKVAEQRERLRELENLIANLGTGEETVTDQAFEERLKQAERD
VMELLREAQNSKDVDQGLMDRLRDINSTLTSQLSRLRNIQNTVQETENLAEQARGRVEDT
EDLIAMASDMLEKAKMAAGNVSITPPESSGDPNNMTLLAEEARRLAERHKQEADEIVRIA
KAANDTSTEAYQLLLKTLAGENQTARDIDELNQKYNQARNISRDLERQANSVLEEAEEAG
NKALQIYANLTNLPTVDTTGLESEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEV
KNLLEKGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNK
TAAEEALKKIPAITQTIAEANNKTHQAELALGNAAADAREAKTRADDAEKIASAVQKSAA
ATRAEADKTFSDVTGLAREVDDMMKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAED
NARKAKNSVNSLLAVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVAFL
EREARKQDDAIQSYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq 4467 nt NT seq  +upstreamnt  +downstreamnt
atctttgttgtaagttgtttcagcctttctcactcctttgttccatctcctgcaggaaag
gcctttgacatcacatacgtgagactgaagttccacaccagcaggccagaaagcttcgcc
atctacaaacgcacacgggaggatggcccgtgggtgccctaccagtattacagtgggtct
tgtgagagcacctataacaaagtcaaccggggctttattcggactggggaggacgagcag
caggctctctgcacggatgagttcagtgacatctcccccctcactgggggcaacgtggct
ttctcaacgttggagggacgtcccagcgcctacaactttgacaacagccctgtgctgcag
gaatgggtgacggccaccgatattcgggtgagcctcaaccgcctcaacaccttcggagat
gaagttttcaatgatcccaaagtcctcaagtcgtattactacgcgatttctgattttgcc
gtgggtggtagatgcaaatgcaatggccacgcgagcgagtgcataaggaacgagcttggg
aagctggtctgcaactgcaagcacaacacctttggggacgactgtgagaagtgccttccc
ttcttcaatgaccggccgtggaggagagcaacagcagaaagtgccaacgagtgcttgcct
tgtgactgcaatgggagatcacaggagtgctatttcgaccctgagctgtaccgctccacc
ggccacggcgggcactgctcgggctgccgggacaacaccgacggcgcccactgcgagagg
tgcagggacagcttctaccgcctcgggagcgaggagggctgcctgccctgcagctgcaac
cccgtgggctccctcagcacgcagtgtgatagctatggccagtgcagctgcaaacctgga
gtcatgggagagaaatgtgaccgctgccagccgggcttccactccctctctgaggctggg
tgcaggccctgttcttgcaatcctgctggcagcacaggtgaatgcaacatggaaacagga
cggtgtacttgcaaggacaatgttgagggcttccactgtgagagatgcaaacctgggttt
ttccatctggatccctcaaatccaagaggctgtaccccctgcttctgttttggacactct
tcggtttgcgccaatgccgttggctacagcgtgtacagcatcacctccagctttcagttt
ggagaggacgagtggcatgctgagcaacgtgatggctcccaagtcccagtgcagtggagt
ccagagacccaggacatctctgtcatctcagacagttacttccccatctactttgttgca
ccacgcaagttcttgggcaaccaagttttgagctacggtcagaatctgaccttctccttc
cgcgtggacagacgggacacacgtctctctgcagaggacctagtgctggaaggggccggg
ctgcgtgtgtcggtgcctctcattgcccagggcaactcgtaccccagtgagagcccactg
acctacaccttcaggctccatgaggctgccgattacccgtggaggcctgctctctctgca
ttcgacttccagaagcttcttcacaatttgactgccatcaagatccgtggaacgtacagt
gagagaagtgccggccacctggatgacgttaccatcaccagcgctgtcccaggggccggc
gtgcctgcggcgtgggtggagagctgctcctgccctgcaggctatgaggggcagttctgt
gagcgctgctcccccgggtaccgccgagagacccctggcctgggaccctacagcccctgc
gtgccttgcagctgcaatgggcacagcgagacctgtgatcctgagacgggcgtatgtgac
tgcagggataacactgcgggctctcagtgtgagaagtgcagcgatgggtactacggagat
gcgacagcgggcacagccttggactgccagccctgtccatgccctggtggctccagctgc
gctgtcgtgccccgcacaagggaggttgtgtgcaccagctgccagacgggcaccacaggc
aagaggtgtgagctgtgtgacgatgcctactttggagacccgctgggtgaaaatggggct
gtgaggccatgtcgcctgtgccagtgcaatgacaacatcgatcccaacgctgtgggcaac
tgcaaccggcagacaggagagtgcctcaagtgcatctacaacacggccggcttctattgc
gaccgctgcaaggatggcttctttgggaaccccttggcccccaaccctgctgacaaatgc
cgggcttgtcactgtaatccctacggcaccgtgaatcagcagacgagctgcaaccaagtg
acagggcaatgtgagtgcctttcccatgtcaccgagagggactgcagtgcctgcgagccc
ggcttcttcaacctgcagagcggccgaggctgtgagaggtgtgactgccacgctctgggc
tccaccaacggccagtgtgacatatggacggggcagtgtgagtgccagcccggcgtcacc
ggccagcgctgcgaccgctgcgaggccaaccactttgggttcggccccgagggctgcaaa
ccatgtgactgtgacccggagggctcacgcgccctgcagtgccgtgaggatggtcgctgt
gagtgcaaggagggctttgtggggaaccgctgcgaccagtgcgaggagaactacttctac
aacaggtcatggccaggctgccaggagtgccctgcatgttacagattagtgaaagataag
gtggcagagcaacgagaaaggctacgggagctggaaaaccttatagcaaacctgggcacg
ggagaagaaactgtcactgatcaagccttcgaggagaggttgaagcaggcagaaagagat
gtcatggagctgctccgagaagcacagaacagcaaagacgtagatcagggtctcatggat
cgtctcagagacatcaacagcacgctgacaagtcagctcagcaggctgaggaacatccag
aacacagtgcaggagacagagaacctggcagagcaagcccggggccgggtggaggacaca
gaggacctgattgcaatggcttctgatatgttggagaaggcaaagatggcagctggcaac
gtgtccattacacccccggagtcgagtggtgaccccaacaacatgactctattggcagaa
gaggctcgccggctggctgagaggcacaaacaagaagctgatgagattgttcgcattgcc
aaggcagccaacgatacttccacagaagcgtatcagctgctgctgaagaccctggctggg
gaaaaccaaacggcacgtgatattgatgagctcaaccagaaatataaccaagcaagaaac
atttctcgagatctggagagacaggccaacagtgtgcttgaggaggcagaggaagctgga
aataaggccctccagatctatgctaatctcaccaatctgcccactgtggacaccacgggg
ctggagagtgaagcaaataagatcaagaaggaagcggaggagttagatcagttaatagca
aggaagttgaaggactatgaagacctgagggaagacatgaaaggaaaggagctggaagtc
aagaacctcttggagaaagggaagacggagcagcagactgcagaccagctcctggctcga
gcagatgcagcaaaagccctggctgaggaagctgctcggaagggcaatggcacactgcag
gaggccaacaccattctcagcaacctgaaagatttcgataagcgggtgaacgacaacaag
acagcagctgaggaggctctgaagaagattcctgccattacccagaccattgctgaagcc
aacaacaagacccaccaggcagagctggctcttggcaatgctgctgctgatgcccgtgaa
gccaaaactagagcagatgatgctgagaaaattgccagcgctgttcagaagagtgctgct
gctaccagagcagaagcggacaagaccttctctgacgtgacggggctggccagagaggtg
gatgacatgatgaagcaactccaggaggcagaaaaagagctgaagcgtaaacaagatgat
gctgaccaggatatgatgatggcaggcatggcctcacaggcagcccaggaggcagaagac
aatgcaagaaaagcaaaaaactctgtgaacagcttgcttgctgtcattaatgacctttta
gaccaactagggcaactggagacggtggacttgaacaaactgaatgagattgagggtacc
ctgaacagtgccaaagaccagatgaaagatagcgacctggaccagaaggtggctttcctt
gagagagaagccaggaagcaagatgatgcgatacagtcctacaacagggacattgaggaa
atcctgaaagacattagcaacctggaggacatcaggaagaccttgccatctggctgtttt
aacaccccgtccattgagaaaccctaa

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