KEGG   Meleagris gallopavo (turkey): 100541563Help
Entry
100541563         CDS       T01523                                 

Gene name
LAMC1
Definition
laminin, gamma 1 (formerly LAMB2)
Orthology
K05635  
laminin, gamma 1
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:mgp00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100541563 (LAMC1)
 Cellular Processes
  Cellular commiunity
   04510 Focal adhesion
    100541563 (LAMC1)
Cell adhesion molecules and their ligands [BR:mgp04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100541563 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-3
      100541563 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100541563 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
10
AA seq 1501 aa AA seqDB search
MLQECVFKSPERILFGGCCFSLSHSFVPSPAGKAFDITYVRLKFHTSRPESFAIYKRTRE
DGPWVPYQYYSGSCESTYNKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGR
PSAYNFDNSPVLQEWVTATDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKC
NGHASECIRNELGKLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRS
QECYFDPELYRSTGHGGHCSGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLST
QCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGSTGECNMETGRCTCKDN
VEGFHCERCKPGFFHLDPSNPRGCTPCFCFGHSSVCANAVGYSVYSITSSFQFGEDEWHA
EQRDGSQVPVQWSPETQDISVISDSYFPIYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDT
RLSAEDLVLEGAGLRVSVPLIAQGNSYPSESPLTYTFRLHEAADYPWRPALSAFDFQKLL
HNLTAIKIRGTYSERSAGHLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGY
RRETPGLGPYSPCVPCSCNGHSETCDPETGVCDCRDNTAGSQCEKCSDGYYGDATAGTAL
DCQPCPCPGGSSCAVVPRTREVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLC
QCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACHCNP
YGTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCD
IWTGQCECQPGVTGQRCDRCEANHFGFGPEGCKPCDCDPEGSRALQCREDGRCECKEGFV
GNRCDQCEENYFYNRSWPGCQECPACYRLVKDKVAEQRERLRELENLIANLGTGEETVTD
QAFEERLKQAERDVMELLREAQNSKDVDQGLMDRLRDINSTLTSQLSRLRNIQNTVQETE
NLAEQARGRVEDTEDLIAMASDMLEKAKMAAGNVSITPPESSGDPNNMTLLAEEARRLAE
RHKQEADEIVRIAKAANDTSTEAYQLLLKTLAGENQTARDIDELNQKYNQARNISRDLER
QANSVLEEAEEAGNKALQIYANLTNLPTVDTTGLESEANKIKKEAEELDQLIARKLKDYE
DLREDMKGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILS
NLKDFDKRVNDNKTAAEEALKKIPAITQTIAEANNKTHQAELALGNAAADAREAKTRADD
AEKIASAVQKSAAATRAEADKTFSDVTGLAREVDDMMKQLQEAEKELKRKQDDADQDMMM
AGMASQAAQEAEDNARKAKNSVNSLLAVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQ
MKDSDLDQKVAFLEREARKQDDAIQSYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEK
P
NT seq 4506 nt NT seq  +upstreamnt  +downstreamnt
atgctccaggagtgcgtgttcaagtcaccagagagaatcctctttggaggatgttgtttc
agcctttctcactcctttgttccatctcctgcaggaaaggcctttgacatcacatacgtg
agactgaagttccacaccagcaggccagaaagcttcgccatctacaaacgcacacgggag
gatggcccgtgggtgccctaccagtattacagtgggtcttgtgagagcacctataacaaa
gtcaaccggggctttattcggactggggaggacgagcagcaggctctctgcacggatgag
ttcagtgacatctcccccctcactgggggcaacgtggctttctcaacgttggagggacgt
cccagcgcctacaactttgacaacagccctgtgctgcaggaatgggtgacggccaccgat
attcgggtgagcctcaaccgcctcaacaccttcggagatgaagttttcaatgatcccaaa
gtcctcaagtcgtattactacgcgatttctgattttgccgtgggtggtagatgcaaatgc
aatggccacgcgagcgagtgcataaggaacgagcttgggaagctggtctgcaactgcaag
cacaacacctttggggacgactgtgagaagtgccttcccttcttcaatgaccggccgtgg
aggagagcaacagcagaaagtgccaacgagtgcttgccttgtgactgcaatgggagatca
caggagtgctatttcgaccctgagctgtaccgctccaccggccacggcgggcactgctcg
ggctgccgggacaacaccgacggcgcccactgcgagaggtgcagggacagcttctaccgc
ctcgggagcgaggagggctgcctgccctgcagctgcaaccccgtgggctccctcagcacg
cagtgtgatagctatggccagtgcagctgcaaacctggagtcatgggagagaaatgtgac
cgctgccagccgggcttccactccctctctgaggctgggtgcaggccctgttcttgcaat
cctgctggcagcacaggtgaatgcaacatggaaacaggacggtgtacttgcaaggacaat
gttgagggcttccactgtgagagatgcaaacctgggtttttccatctggatccctcaaat
ccaagaggctgtaccccctgcttctgttttggacactcttcggtttgcgccaatgccgtt
ggctacagcgtgtacagcatcacctccagctttcagtttggagaggacgagtggcatgct
gagcaacgtgatggctcccaagtcccagtgcagtggagtccagagacccaggacatctct
gtcatctcagacagttacttccccatctactttgttgcaccacgcaagttcttgggcaac
caagttttgagctacggtcagaatctgaccttctccttccgcgtggacagacgggacaca
cgtctctctgcagaggacctagtgctggaaggggccgggctgcgtgtgtcggtgcctctc
attgcccagggcaactcgtaccccagtgagagcccactgacctacaccttcaggctccat
gaggctgccgattacccgtggaggcctgctctctctgcattcgacttccagaagcttctt
cacaatttgactgccatcaagatccgtggaacgtacagtgagagaagtgccggccacctg
gatgacgttaccatcaccagcgctgtcccaggggccggcgtgcctgcggcgtgggtggag
agctgctcctgccctgcaggctatgaggggcagttctgtgagcgctgctcccccgggtac
cgccgagagacccctggcctgggaccctacagcccctgcgtgccttgcagctgcaatggg
cacagcgagacctgtgatcctgagacgggcgtatgtgactgcagggataacactgcgggc
tctcagtgtgagaagtgcagcgatgggtactacggagatgcgacagcgggcacagccttg
gactgccagccctgtccatgccctggtggctccagctgcgctgtcgtgccccgcacaagg
gaggttgtgtgcaccagctgccagacgggcaccacaggcaagaggtgtgagctgtgtgac
gatgcctactttggagacccgctgggtgaaaatggggctgtgaggccatgtcgcctgtgc
cagtgcaatgacaacatcgatcccaacgctgtgggcaactgcaaccggcagacaggagag
tgcctcaagtgcatctacaacacggccggcttctattgcgaccgctgcaaggatggcttc
tttgggaaccccttggcccccaaccctgctgacaaatgccgggcttgtcactgtaatccc
tacggcaccgtgaatcagcagacgagctgcaaccaagtgacagggcaatgtgagtgcctt
tcccatgtcaccgagagggactgcagtgcctgcgagcccggcttcttcaacctgcagagc
ggccgaggctgtgagaggtgtgactgccacgctctgggctccaccaacggccagtgtgac
atatggacggggcagtgtgagtgccagcccggcgtcaccggccagcgctgcgaccgctgc
gaggccaaccactttgggttcggccccgagggctgcaaaccatgtgactgtgacccggag
ggctcacgcgccctgcagtgccgtgaggatggtcgctgtgagtgcaaggagggctttgtg
gggaaccgctgcgaccagtgcgaggagaactacttctacaacaggtcatggccaggctgc
caggagtgccctgcatgttacagattagtgaaagataaggtggcagagcaacgagaaagg
ctacgggagctggaaaaccttatagcaaacctgggcacgggagaagaaactgtcactgat
caagccttcgaggagaggttgaagcaggcagaaagagatgtcatggagctgctccgagaa
gcacagaacagcaaagacgtagatcagggtctcatggatcgtctcagagacatcaacagc
acgctgacaagtcagctcagcaggctgaggaacatccagaacacagtgcaggagacagag
aacctggcagagcaagcccggggccgggtggaggacacagaggacctgattgcaatggct
tctgatatgttggagaaggcaaagatggcagctggcaacgtgtccattacacccccggag
tcgagtggtgaccccaacaacatgactctattggcagaagaggctcgccggctggctgag
aggcacaaacaagaagctgatgagattgttcgcattgccaaggcagccaacgatacttcc
acagaagcgtatcagctgctgctgaagaccctggctggggaaaaccaaacggcacgtgat
attgatgagctcaaccagaaatataaccaagcaagaaacatttctcgagatctggagaga
caggccaacagtgtgcttgaggaggcagaggaagctggaaataaggccctccagatctat
gctaatctcaccaatctgcccactgtggacaccacggggctggagagtgaagcaaataag
atcaagaaggaagcggaggagttagatcagttaatagcaaggaagttgaaggactatgaa
gacctgagggaagacatgaaaggaaaggagctggaagtcaagaacctcttggagaaaggg
aagacggagcagcagactgcagaccagctcctggctcgagcagatgcagcaaaagccctg
gctgaggaagctgctcggaagggcaatggcacactgcaggaggccaacaccattctcagc
aacctgaaagatttcgataagcgggtgaacgacaacaagacagcagctgaggaggctctg
aagaagattcctgccattacccagaccattgctgaagccaacaacaagacccaccaggca
gagctggctcttggcaatgctgctgctgatgcccgtgaagccaaaactagagcagatgat
gctgagaaaattgccagcgctgttcagaagagtgctgctgctaccagagcagaagcggac
aagaccttctctgacgtgacggggctggccagagaggtggatgacatgatgaagcaactc
caggaggcagaaaaagagctgaagcgtaaacaagatgatgctgaccaggatatgatgatg
gcaggcatggcctcacaggcagcccaggaggcagaagacaatgcaagaaaagcaaaaaac
tctgtgaacagcttgcttgctgtcattaatgaccttttagaccaactagggcaactggag
acggtggacttgaacaaactgaatgagattgagggtaccctgaacagtgccaaagaccag
atgaaagatagcgacctggaccagaaggtggctttccttgagagagaagccaggaagcaa
gatgatgcgatacagtcctacaacagggacattgaggaaatcctgaaagacattagcaac
ctggaggacatcaggaagaccttgccatctggctgttttaacaccccgtccattgagaaa
ccctaa

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