KEGG   Meleagris gallopavo (turkey): 100541563Help
Entry
100541563         CDS       T01523                                 

Gene name
LAMC1
Definition
laminin, gamma 1 (formerly LAMB2)
Orthology
K05635  
laminin, gamma 1
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:mgp00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100541563 (LAMC1)
 Cellular Processes
  Cell communication
   04510 Focal adhesion
    100541563 (LAMC1)
Cell adhesion molecules and their ligands [BR:mgp04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100541563 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-3
      100541563 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100541563 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100541563 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100541563 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
10
AA seq 1571 aa AA seqDB search
MRVRLSNIPSDVASSWIFHITGNFVVKVDQTESPPQRGCLCAVMEVLTVKAAKNLEIIWQ
LDPPDEQMWNVIYQIPRPPAAGIKLMAANGSLSHSFVPSPAGKAFDITYVRLKFHTSRPE
SFAIYKRTREDGPWVPYQYYSGSCESTYNKVNRGFIRTGEDEQQALCTDEFSDISPLTGG
NVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVSLNRLNTFGDEVFNDPKVLKSYYYAIS
DFAVGGRCKCNGHASECIRNELGKLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANE
CLPCDCNGRSQECYFDPELYRSTGHGGHCSGCRDNTDGAHCERCRDSFYRLGSEEGCLPC
SCNPVGSLSTQCDSYGQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGSTGECNM
ETGRCTCKDNVEGFHCERCKPGFFHLDPSNPRGCTPCFCFGHSSVCANAVGYSVYSITSS
FQFGEDEWHAEQRDGSQVPVQWSPETQDISVISDSYFPIYFVAPRKFLGNQVLSYGQNLT
FSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSYPSESPLTYTFRLHEAADYPWRPA
LSAFDFQKLLHNLTAIKIRGTYSERSAGHLDDVTITSAVPGAGVPAAWVESCSCPAGYEG
QFCERCSPGYRRETPGLGPYSPCVPCSCNGHSETCDPETGVCDCRDNTAGSQCEKCSDGY
YGDATAGTALDCQPCPCPGGSSCAVVPRTREVVCTSCQTGTTGKRCELCDDAYFGDPLGE
NGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPA
DKCRACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCH
ALGSTNGQCDIWTGQCECQPGVTGQRCDRCEANHFGFGPEGCKPCDCDPEGSRALQCRED
GRCECKEGFVGNRCDQCEENYFYNRSWPGCQECPACYRLVKDKVAEQRERLRELENLIAN
LGTGEETVTDQAFEERLKQAERDVMELLREAQNSKDVDQGLMDRLRDINSTLTSQLSRLR
NIQNTVQETENLAEQARGRVEDTEDLIAMASDMLEKAKMAAGNVSITPPESSGDPNNMTL
LAEEARRLAERHKQEADEIVRIAKAANDTSTEAYQLLLKTLAGENQTARDIDELNQKYNQ
ARNISRDLERQANSVLEEAEEAGNKALQIYANLTNLPTVDTTGLESEANKIKKEAEELDQ
LIARKLKDYEDLREDMKGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAARKGNG
TLQEANTILSNLKDFDKRVNDNKTAAEEALKKIPAITQTIAEANNKTHQAELALGNAAAD
AREAKTRADDAEKIASAVQKSAAATRAEADKTFSDVTGLAREVDDMMKQLQEAEKELKRK
QDDADQDMMMAGMASQAAQEAEDNARKAKNSVNSLLAVINDLLDQLGQLETVDLNKLNEI
EGTLNSAKDQMKDSDLDQKVAFLEREARKQDDAIQSYNRDIEEILKDISNLEDIRKTLPS
GCFNTPSIEKP
NT seq 4716 nt NT seq  +upstreamnt  +downstreamnt
atgagagtaaggctctcaaacattccttcagatgttgcaagcagctggatttttcacatc
acaggcaattttgttgtgaaggtggatcaaactgagagccccccgcagcgtggctgcctg
tgtgctgtgatggaagtgctcacagtgaaagcagctaaaaacctggagatcatttggcag
ctggacccaccagatgagcaaatgtggaatgtgatctatcagatccccaggccgccagca
gcaggcatcaagctcatggctgccaatggaagcctttctcactcctttgttccatctcct
gcaggaaaggcctttgacatcacatacgtgagactgaagttccacaccagcaggccagaa
agcttcgccatctacaaacgcacacgggaggatggcccgtgggtgccctaccagtattac
agtgggtcttgtgagagcacctataacaaagtcaaccggggctttattcggactggggag
gacgagcagcaggctctctgcacggatgagttcagtgacatctcccccctcactgggggc
aacgtggctttctcaacgttggagggacgtcccagcgcctacaactttgacaacagccct
gtgctgcaggaatgggtgacggccaccgatattcgggtgagcctcaaccgcctcaacacc
ttcggagatgaagttttcaatgatcccaaagtcctcaagtcgtattactacgcgatttct
gattttgccgtgggtggtagatgcaaatgcaatggccacgcgagcgagtgcataaggaac
gagcttgggaagctggtctgcaactgcaagcacaacacctttggggacgactgtgagaag
tgccttcccttcttcaatgaccggccgtggaggagagcaacagcagaaagtgccaacgag
tgcttgccttgtgactgcaatgggagatcacaggagtgctatttcgaccctgagctgtac
cgctccaccggccacggcgggcactgctcgggctgccgggacaacaccgacggcgcccac
tgcgagaggtgcagggacagcttctaccgcctcgggagcgaggagggctgcctgccctgc
agctgcaaccccgtgggctccctcagcacgcagtgtgatagctatggccagtgcagctgc
aaacctggagtcatgggagagaaatgtgaccgctgccagccgggcttccactccctctct
gaggctgggtgcaggccctgttcttgcaatcctgctggcagcacaggtgaatgcaacatg
gaaacaggacggtgtacttgcaaggacaatgttgagggcttccactgtgagagatgcaaa
cctgggtttttccatctggatccctcaaatccaagaggctgtaccccctgcttctgtttt
ggacactcttcggtttgcgccaatgccgttggctacagcgtgtacagcatcacctccagc
tttcagtttggagaggacgagtggcatgctgagcaacgtgatggctcccaagtcccagtg
cagtggagtccagagacccaggacatctctgtcatctcagacagttacttccccatctac
tttgttgcaccacgcaagttcttgggcaaccaagttttgagctacggtcagaatctgacc
ttctccttccgcgtggacagacgggacacacgtctctctgcagaggacctagtgctggaa
ggggccgggctgcgtgtgtcggtgcctctcattgcccagggcaactcgtaccccagtgag
agcccactgacctacaccttcaggctccatgaggctgccgattacccgtggaggcctgct
ctctctgcattcgacttccagaagcttcttcacaatttgactgccatcaagatccgtgga
acgtacagtgagagaagtgccggccacctggatgacgttaccatcaccagcgctgtccca
ggggccggcgtgcctgcggcgtgggtggagagctgctcctgccctgcaggctatgagggg
cagttctgtgagcgctgctcccccgggtaccgccgagagacccctggcctgggaccctac
agcccctgcgtgccttgcagctgcaatgggcacagcgagacctgtgatcctgagacgggc
gtatgtgactgcagggataacactgcgggctctcagtgtgagaagtgcagcgatgggtac
tacggagatgcgacagcgggcacagccttggactgccagccctgtccatgccctggtggc
tccagctgcgctgtcgtgccccgcacaagggaggttgtgtgcaccagctgccagacgggc
accacaggcaagaggtgtgagctgtgtgacgatgcctactttggagacccgctgggtgaa
aatggggctgtgaggccatgtcgcctgtgccagtgcaatgacaacatcgatcccaacgct
gtgggcaactgcaaccggcagacaggagagtgcctcaagtgcatctacaacacggccggc
ttctattgcgaccgctgcaaggatggcttctttgggaaccccttggcccccaaccctgct
gacaaatgccgggcttgtcactgtaatccctacggcaccgtgaatcagcagacgagctgc
aaccaagtgacagggcaatgtgagtgcctttcccatgtcaccgagagggactgcagtgcc
tgcgagcccggcttcttcaacctgcagagcggccgaggctgtgagaggtgtgactgccac
gctctgggctccaccaacggccagtgtgacatatggacggggcagtgtgagtgccagccc
ggcgtcaccggccagcgctgcgaccgctgcgaggccaaccactttgggttcggccccgag
ggctgcaaaccatgtgactgtgacccggagggctcacgcgccctgcagtgccgtgaggat
ggtcgctgtgagtgcaaggagggctttgtggggaaccgctgcgaccagtgcgaggagaac
tacttctacaacaggtcatggccaggctgccaggagtgccctgcatgttacagattagtg
aaagataaggtggcagagcaacgagaaaggctacgggagctggaaaaccttatagcaaac
ctgggcacgggagaagaaactgtcactgatcaagccttcgaggagaggttgaagcaggca
gaaagagatgtcatggagctgctccgagaagcacagaacagcaaagacgtagatcagggt
ctcatggatcgtctcagagacatcaacagcacgctgacaagtcagctcagcaggctgagg
aacatccagaacacagtgcaggagacagagaacctggcagagcaagcccggggccgggtg
gaggacacagaggacctgattgcaatggcttctgatatgttggagaaggcaaagatggca
gctggcaacgtgtccattacacccccggagtcgagtggtgaccccaacaacatgactcta
ttggcagaagaggctcgccggctggctgagaggcacaaacaagaagctgatgagattgtt
cgcattgccaaggcagccaacgatacttccacagaagcgtatcagctgctgctgaagacc
ctggctggggaaaaccaaacggcacgtgatattgatgagctcaaccagaaatataaccaa
gcaagaaacatttctcgagatctggagagacaggccaacagtgtgcttgaggaggcagag
gaagctggaaataaggccctccagatctatgctaatctcaccaatctgcccactgtggac
accacggggctggagagtgaagcaaataagatcaagaaggaagcggaggagttagatcag
ttaatagcaaggaagttgaaggactatgaagacctgagggaagacatgaaaggaaaggag
ctggaagtcaagaacctcttggagaaagggaagacggagcagcagactgcagaccagctc
ctggctcgagcagatgcagcaaaagccctggctgaggaagctgctcggaagggcaatggc
acactgcaggaggccaacaccattctcagcaacctgaaagatttcgataagcgggtgaac
gacaacaagacagcagctgaggaggctctgaagaagattcctgccattacccagaccatt
gctgaagccaacaacaagacccaccaggcagagctggctcttggcaatgctgctgctgat
gcccgtgaagccaaaactagagcagatgatgctgagaaaattgccagcgctgttcagaag
agtgctgctgctaccagagcagaagcggacaagaccttctctgacgtgacggggctggcc
agagaggtggatgacatgatgaagcaactccaggaggcagaaaaagagctgaagcgtaaa
caagatgatgctgaccaggatatgatgatggcaggcatggcctcacaggcagcccaggag
gcagaagacaatgcaagaaaagcaaaaaactctgtgaacagcttgcttgctgtcattaat
gaccttttagaccaactagggcaactggagacggtggacttgaacaaactgaatgagatt
gagggtaccctgaacagtgccaaagaccagatgaaagatagcgacctggaccagaaggtg
gctttccttgagagagaagccaggaagcaagatgatgcgatacagtcctacaacagggac
attgaggaaatcctgaaagacattagcaacctggaggacatcaggaagaccttgccatct
ggctgttttaacaccccgtccattgagaaaccctaa

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