KEGG   Meleagris gallopavo (turkey): 100542373Help
Entry
100542373         CDS       T01523                                 

Gene name
THBS1
Definition
(RefSeq) thrombospondin 1
  KO
K16857  
thrombospondin 1
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
p53 signaling pathway
Phagosome
TGF-beta signaling pathway
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:mgp00001]
 Environmental Information Processing
  Signal transduction
   04350 TGF-beta signaling pathway
    100542373 (THBS1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100542373 (THBS1)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    100542373 (THBS1)
  Cell growth and death
   04115 p53 signaling pathway
    100542373 (THBS1)
  Cellular community - eukaryotes
   04510 Focal adhesion
    100542373 (THBS1)
Membrane trafficking [BR:mgp04131]
 Endocytosis
  Phagocytosis
   Opsonins
    100542373 (THBS1)
Cell adhesion molecules and their ligands [BR:mgp04516]
 2. Integrin Family
  Beta1 integrins
   VLA-3
    ITGB1; integrin beta 1 [KO:K05719]
     100542373 (THBS1)
Glycosaminoglycan binding proteins [BR:mgp00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
   100542373 (THBS1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
Position
5
AA seq 1180 aa AA seqDB search
MLAMGPAAGLVLLLLALGSPEAKRTAESRGDDDNVFDVFEHLNLNRNGAGRRAPGVHLVK
GPESSSPAYRIEDASRIPAVPDSKFQDLLDIIHAEKGFILLATLRQAKKSRGTLLSVERK
DGSGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVG
CEKMENAELDIPIQKIFSRGLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTPETILRNK
GCSSSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMV
TTLQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRK
VSCPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLN
NRCEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLN
GKPCEGEARETKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKT
CVGEAKGTQVCNKQDCPVDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHCQDID
ECKEVPDACFVFNGEHRCENTEPGYNCLPCPPRFTGSQPFGRSVEDAMANKQVCKPRNPC
TDGTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANAT
YHCKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGISDDRDNCPFIYNPQQYDYDRDDV
GDRCDNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVG
DQCDNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGK
GDACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENV
EISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSG
TFFINTERDDDYAGFVFAYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTT
GPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKK
IMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq 3543 nt NT seq  +upstreamnt  +downstreamnt
atgctcgccatggggccagccgctggtctcgttctccttctcctggcgctcggcagcccg
gaagccaaacgcacggcagagtccaggggtgatgatgacaacgtctttgatgtctttgaa
caccttaacttgaatcgcaacggagctgggcgccgggcacctggggtgcatctggtgaag
gggccggagtcctccagccctgcttaccgcattgaagatgccagtcgtatccctgctgtc
cctgactccaagttccaagacttgttagatatcatccatgctgagaagggcttcatcctt
ctggccactctccggcaagccaagaagagcagaggcacactgctgtctgtggaacggaaa
gacggctctggtcatgtcttcagtctagtttcaaatggcaaggcaggcaccttggacctg
agcctctctggtgatggcaagcagcagttagtgtctgtagaggatgctttgttagctaca
ggacactggaagaacatcaccttgtttgtgcaagaagaccgggctcagctttatgtgggg
tgtgagaaaatggagaatgctgaactggacattcccattcaaaagattttcagcaggggc
ctggccagcagtgccaggcttcgtattgccaaagggggagtcaatgacaacttccaggga
ctgttgcagaacgtacggttcgtgtttggaacaactccggaaactattctgaggaacaaa
ggctgctccagctctactagtgcaatcattactttggacaaccccataaatggttccagc
ccagctatccgcaccaactacattggccataaaacaaaggacattcaagcagtctgtggc
ttttcctgtgatgaactaactaacatgtttgtagaactgcaagggctacggtccatggtt
acaacacttcaagacagagttcgcaaagtgactgaagaaaatgaactgattgccaaagtg
gtccagatcactcctggagtatgcattcataatgggatcttgcacaaaaataaggaagag
tggactattgacagctgcactgaatgtacttgccagaactctgccactatatgccggaaa
gtgtcttgccctctcatgccttgttccaatgccactgtgcctgatggggagtgctgcccc
cgatgctggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttca
tgttcagtgacctgtgggaatggaattcagcagagagggcgttcctgtgacagcctcaac
aaccgctgtgaagggtcttctgtgcagactcggacttgccaccttcaagagtgtgataag
agatttaaacaagatggtggttggagccactggtcaccgtggtcatcatgttcagtcacc
tgtggtacaggcatgatcactagaattcgtctctgcaactctccagtaccacagctgaat
ggcaagccttgtgagggtgaagcaagagaaaccaagccctgccagaaagatccttgccca
attaacggcaactggggaccatggtctccatgggatgcttgcacagtgacatgtggagga
ggacttcagaaacgcagccgtctctgcaataatcccgagcctcaatatggtgggaagact
tgtgtaggtgaagctaaaggaactcaggtctgcaacaaacaggactgtccagttgatggg
tgtctgtctaatccctgctttgcgggaactacgtgtacaagctcccctgatggttcttgg
aagtgcggtgcctgtcctgctggctaccatggcgatggtatccactgccaagatattgat
gagtgcaaagaagttcctgatgcctgctttgtcttcaatggagaacacaggtgtgagaat
actgaacctggatacaactgtctgccttgtccaccacgtttcactgggtcacagccattt
ggtcgcagtgttgaggatgccatggcaaacaaacaggtctgcaagccacgtaatccatgc
acagatggaacacacgattgcaacaagaatgccaaatgcaattaccttggccacttcagt
gacccgatgtatcgttgtgaatgtaaaccaggctatgctggcaatggcataatctgtgga
gaagatactgacttggatggatggccaaatgagaaccttgtctgtgttgccaatgccact
taccactgtaaaaaagataactgccccaatctccccaactctgggcaggaagactatgat
aaagatgggattggtgatgcctgtgataatgatgatgacgatgatggtatttctgatgac
cgggacaactgcccattcatctacaacccacagcagtatgactatgacagggatgatgtt
ggtgaccgttgtgataactgcccctacaatcacaaccctgatcagattgacactgacaac
aatggagaaggagatgcatgtgcagtggatattgatggagatggggtcctcaatgaaagg
gacaactgccaatatgtctacaatgtagaccagagggacacagacttggacggtgttgga
gatcagtgtgataactgtccactggaacataatcctgaccaggaagatactgactctgac
cgtataggtgatgagtgtgacaacaaccaggacatagatgaagatggtcatcaaaataat
cttgataactgcccttatgtgcccaatgccaatcaagctgatcatgacaaggatggaaaa
ggtgatgcctgtgaccatgatgatgacaatgatggtattcctgatgacaaagataactgc
agattagttgccaacccggatcaagcggattctgatggtgatggacgtggagatgcttgc
aaagatgactttgaccaagacagtgtgccagacattgatgacatctgtcccgaaaatgtg
gaaatcagtgagactgacttccgaaggtttcaaatgattcccttggatccaaaaggaaca
tcccaaaatgatccaaactgggttgtacgtcaccagggtaaagaactggttcagacagtc
aactgtgaccctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggc
accttctttatcaatacagaaagggatgatgattatgctggctttgtatttgcctaccaa
tctagcagtcgtttttacgttgtcatgtggaagcagattactcagtcttactgggactcc
acaccaaccaaagctcaaggctactcaggtctctccatcaaggttgtgaattccaccaca
ggtccaggagaacaccttcgtaatgctctgtggcacacaggaaacacacctggccaggtg
agaactttgtggcatgaccctcgtcacataggctggaaagacttcactgcatacagatgg
cgccttagccatagaccaaagactggctacatcagagttgtaatgtatgaagggaagaaa
atcatggcagactcaggaccaatctatgataaaacttatgctggtggtcgtctaggatta
tttgttttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatcca
taa

DBGET integrated database retrieval system