KEGG   Meleagris gallopavo (turkey): 100545906
Entry
100545906         CDS       T01523                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
mgp04510  Focal adhesion
mgp04512  ECM-receptor interaction
mgp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100545906 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100545906 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100545906 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:mgp00535]
    100545906 (COL9A3)
Proteoglycans [BR:mgp00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   100545906 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 100545906
NCBI-ProteinID: XP_003212074
Ensembl: ENSMGAG00000005875
UniProt: G1N302
Position
22:6933129..6968950
AA seq 675 aa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NT seq 2028 nt   +upstreamnt  +downstreamnt
atgactgtattccccactcttgggcttctcttcctttgtcagctattagccacaacatca
gctcagagagtaggaccacaaggccctcctggaccccgaggaccccctggaccatctggc
aaggacggcatagatggtgagccgggccctcctggtttgccaggcccaccaggaccaaag
ggtgcacctggaaagcctggagcagctggtgaagctgggctgcctggccttcctggagta
gacggcttaacgggaactgatggccctcctggcccaaatgggcctccgggagaccgtggt
gcattaggacctgctggaccacctggaccagctggtaaaggactaccaggacctccaggg
cctccaggacccagtggacttccaggtggaaatggatttcggggtcctcctgggccttct
ggtctgccaggattcccagggcctcctggaccacccggacctcccggtcttgcaggcatc
attcccgaaggcggtggggaccttcagtgcccagctctgtgcccaccaggtcctcctggt
cctccaggaatgccaggcttcaagggacacactggtcacaaaggagaacctggtgaaata
ggcaaagaaggagagaagggcagccctggccctccaggtcctccaggcatccctggcagc
gttggcctgcagggcccaagaggactaagaggtctccctggtccaatgggccctgctggt
gacagaggtgacatcggtttcagagggccgcctggaatcccaggacctccggggagagct
ggagaccaaggaatcaaaggacctcaaggattcagagggcccaaaggcgatactggtaga
cccggaccaaaaggaaacccaggggctcgtgggctcataggagaacctggcatgcctggc
aaggatggacgggatggggctcctggactcgatggtgagaagggtgatgcagctcgtatg
ggtgctcctggagagaaggggccaaacggacttcccggtctgcctggaagagcagggatt
aaaggctctaaaggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggtatcccaggcgacgttggtattcctggtgatagaggtctgccgggacccaga
ggagcaactggccccgttggtctcccaggccccattggagcccctggtgtccgaggcttc
cagggtcccaaaggtgccagtggggaacctggccttcctggtccaactggaattcgtgga
gagtctggtgacaggggtcctactggtgttattggtgccaaaggtaaccagggcattgct
ggggcagacggtctcccaggtgacaaaggagaactgggtccctttggtcctcctggccaa
aaaggagagccaggaaaaagaggagaactgggtccaaaaggtgctcaaggacccaatggg
acagctggagctccagggatcccaggacacccagggcccatgggccatcagggggagcag
ggcgttcctggcatcacaggcaaaccagggcctcctggcaaagaggccagtgaacaacat
ataagagaactctgtggggaaatgataaacgatcaaattgcacagttagctgctaatctg
agaaagcccttatctcctgggatgacggggcgccctggccctgctggtcctccaggtcct
ccaggagctacaggaagcgttggccatcctggtgctcgtggtccccctgggtacagaggg
ccaacaggagagcttggtgatcctggtcccagaggtgacactggcgaaaagggagataaa
ggaccggctggacaaggaattgatgggcctgatggtgatcaaggacctcaaggacttcct
ggtgtacctggaattagtaaaaatggtcgggatggtgctcagggtgaacccggtcttcca
ggggatcctggtactcctggtgctgttggggctcagggaactccaggcatatgtgacaca
tcagcttgcatgggagctgtcggagcatcgacttccaaaaagtcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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