KEGG   Mycoplasmoides genitalium M2288: CM5_01005
Entry
CM5_01005         CDS       T02208                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mgu  Mycoplasmoides genitalium M2288
Pathway
mgu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CM5_01005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgu03021]
    CM5_01005
   03400 DNA repair and recombination proteins [BR:mgu03400]
    CM5_01005
Enzymes [BR:mgu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CM5_01005
Transcription machinery [BR:mgu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CM5_01005
DNA repair and recombination proteins [BR:mgu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CM5_01005
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 TelK_muzzle DUF6847
Other DBs
NCBI-ProteinID: AFQ04493
Position
203320..204306
AA seq 328 aa
MEKFLKYEIKVNNNQPTNTNPNYGIFEVAPLESGFGITIGNAMRRVLLSCIPGASVFAIA
ISGVKQEFSNVEGVLEDVTEMVLNFKQLVVRISDLLFEDGEMIEPPLERWPVLKVTAEKK
GAVYAKDLECPAGFEVINKDLYLFSLQKDMKLTVSVYVKQGRGFTSFLENRELINSLGII
ATDANFSPVLHCGYEVQEVKTSKQKLTDHLTFKIATNGAIKAVDAFAMAAKILIEHLNPI
VSVNESIKNLTIIQEKAEERKVKSFAKQIEELDFTVRTFNCLKRSGIHTLQELLSKSLTD
IREIRNLGKKSEREIIKKVQELGLKLRS
NT seq 987 nt   +upstreamnt  +downstreamnt
atggaaaaatttttaaagtacgaaattaaggttaacaacaaccaaccaaccaacactaac
cctaactatgggatctttgaagtagcaccgttagaatcaggatttgggattaccattggt
aatgcgatgcgccgagtgttacttagttgtatcccaggcgctagtgtgtttgccattgcc
attagtggggtaaaacaagagtttagtaatgtggagggtgtgttggaagatgtgactgaa
atggtgttaaacttcaagcaactagtggtgagaatctctgatcttttgtttgaagatggg
gagatgatcgaaccacccttagaaaggtgaccagttttaaaagttactgctgaaaaaaag
ggtgcagtatatgcaaaggatcttgagtgtccagctggttttgaagtgattaataaggac
ctttatctcttctctttacaaaaggacatgaaactaacagtcagtgtttatgttaaacag
ggtaggggctttactagctttcttgaaaacagagaattgatcaattcgcttggcattatt
gctacagatgctaacttttccccggttttacactgtggttatgaagttcaagaggtgaaa
acttccaaacaaaagttaactgaccatctcacctttaagattgctactaacggtgcaatt
aaagcagtggatgcgtttgctatggcagcaaagatcctaattgaacacttaaacccaatt
gtaagtgtcaatgagtcaattaagaatttaacaattatccaagagaaagcagaggaaaga
aaggtgaaatcatttgccaagcaaattgaagaacttgactttactgttagaacctttaac
tgtttgaaaagaagtgggatccacacactccaagagttactatcaaagtcattaactgac
attagagagattagaaacctaggtaagaaatcagaacgggagattatcaaaaaggtgcaa
gagttaggtttaaaactccgttcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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