KEGG   Mycoplasmoides gallisepticum WI01_2001.043-13-2P: HFMG01WIA_1698
Entry
HFMG01WIA_1698    CDS       T02204                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta' (RNAP subunit beta')
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mgw  Mycoplasmoides gallisepticum WI01_2001.043-13-2P
Pathway
mgw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HFMG01WIA_1698 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgw03021]
    HFMG01WIA_1698 (rpoC)
   03400 DNA repair and recombination proteins [BR:mgw03400]
    HFMG01WIA_1698 (rpoC)
Enzymes [BR:mgw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HFMG01WIA_1698 (rpoC)
Transcription machinery [BR:mgw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HFMG01WIA_1698 (rpoC)
DNA repair and recombination proteins [BR:mgw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HFMG01WIA_1698 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 SHOCT Acyl-ACP_TE
Other DBs
NCBI-ProteinID: AFP78885
UniProt: J3YGR8
Position
285299..289159
AA seq 1286 aa
MDKLNKKNKNKRIRGLQISIASAEEMRSWSHGEVKKPETINYKSLKPETDGLFDEAIFGP
VKDFECACGKYKKIKHRGRTCEKCGVEITESIVRRERMGHIDLAVPVAHIWMTKELPSPS
KISLVLDVSYKEVEEVVYFVNYIILNPGNSKNPVFKFKEVVDLSGKGSKSARIKLRKVLR
EIKDKHQADKHSIIYKRASDYYNKLKESHLPFSIDEVAKFIETHTGIRLGIGAEAILELL
EGVDLQKEYDLINEELNSYSKDLKANKEDQKVKRALRRLETIKWLKESGIKASNMILKVI
PVTPPDTRPIIQLDGARFTTSDINNFYRRIIIRNERLKKIIELRAPSVILNNEKRMLQEV
VDALFDNASRKKPITAKDKRPLKSLTDRLKGKQGLFRQNLLGKRVDYSGRSVIVIGPELK
MYEVGIPAPMILKLFKPFIIRELIMRFNEDGQEIKPIAPNIKIAEQMIAQKSERIWDIVD
KVIKERPVLLNRAPTLHRLGIQAFEPKIVDGKAIRLHPLVTTAFNADFDGDQMAVHVPIS
KEAVAEARAIMLASWHILGPKDGKPVATPTQDMVLGNYYLTTEKRNEKGEGLIFSDFDQV
ILAYEAKQVSIHALIGLSTKCLTKKPFAKQGIVITTVGKAIMNSIMPEEMAYLNDGDNLL
ELDESNIVFAGEDFKQKLAKRPLYKPFGKKTLSKIIEILYKNFPLQKVPQVLDKIKEFGF
KYSTLSSTTISVFDIPRYDNKQEYITKANEMIAKLKHMYQKGLLTDDERYTKVIRLWADV
KDNVSRDIKEIITRPEYKENSIVVIADSGARGNISNFTQLFGMRGLMSKSYNYDQKIKSQ
VIRDTIEVPIKHSFIEGLTINEYFNSSYGARKGMTDIAMKTSKSGYMTRKLVDAAQEVII
NDSDCNTNKGIVVSTITNSLDGGVVETLSERIVTRYTIDPIYDEKTKELLVDADTLITSE
LAEKIAKANVTKALIRSPIYCQSTKGLCQKCFGNDLTTNDLVQIGTAIGVIAAQSIGEPG
TQLTMRTFHTGGTANEGNITQGFERLKQIFDVVSPKEWELATIAENEGVVESITSDATAR
IIRIKTRLEAEEYRVPFDAVISVNPKDVVYPGSKLTEGSIDIKHLLRVAGIETVRQYFLE
EVQKVYRLQGIEIADKYVEVTIRQLTNKLQVIDVGDSDYFVGQTVDINKFRKEVTNMLIA
NKRPPVAINQVFGLDEAPAKTGSFLSAASFQDTKKILTDAAVKNQIDYLVGLKENVILGN
LIPAGTGFMSSEEIIKAGEEALEKEY
NT seq 3861 nt   +upstreamnt  +downstreamnt
atggataagctaaacaaaaaaaataaaaataaacgaattcgtggtttgcaaatctcgatt
gcttcagctgaagagatgagatcttgatctcatggtgaagtaaaaaaacctgaaacaatt
aactataaatcattaaaacctgaaactgatggtttatttgatgaagcaatctttggacct
gtcaaagactttgaatgtgcttgtggtaaatataaaaagatcaaacaccgtggtcgtact
tgtgaaaaatgtggtgttgagattactgaatcaatcgtaagaagagaacgaatgggtcat
attgatcttgctgttccagtagctcacatctgaatgactaaagaattaccttcaccttca
aagatctctttagtattagatgtttcttataaagaagttgaagaggtagtttactttgta
aactacattatcttaaacccggggaattcaaaaaacccggttttcaagtttaaagaagtt
gtcgatctatctggtaagggctctaaatctgccagaattaagttacgtaaagttttacgt
gaaattaaagataagcaccaagctgataaacattcaatcatttataaacgcgcatcagat
tattacaacaaactaaaagagtcacacctaccgttttcaatcgatgaagttgctaaattc
attgaaacacacacaggaattagattagggatcggtgctgaagcgatcttagaactatta
gaaggtgttgatctacaaaaagaatatgacttaattaatgaagaattaaattcatattca
aaagatttaaaagctaataaagaagatcaaaaagttaaaagagcactacgtcgtttagaa
acgattaagtgattaaaagaatctggaatcaaagcatctaatatgatcttaaaagtgatt
ccagttaccccacctgacactagaccgatcatccaattagatggggcgcgctttactact
agtgatattaataacttctatcgccgaatcattattcgtaatgaacggttaaagaagatt
attgaactacgtgcaccttctgttattcttaataatgaaaaaagaatgcttcaagaagtg
gttgatgcattatttgataatgcttcaagaaaaaaaccgattactgcaaaagacaagcgt
ccacttaaatcattaactgatcgcttaaaaggtaaacaaggtttattcagacaaaaccta
ttaggtaaacgggtagactattctggtcgttcagtaattgtgatcggtcctgaacttaag
atgtatgaagtaggaattcctgctcctatgatcttaaagttgttcaaaccattcattatt
cgcgaactaattatgcgctttaatgaagatggtcaagagatcaaaccgatcgcaccaaac
attaagattgctgaacagatgatcgcccaaaaatctgaacgaatttgggatatcgttgat
aaggtaattaaagaaagaccagtattacttaatcgggcgccaacattacaccgattaggg
atccaagcttttgaacctaagattgttgatgggaaagcaatccgcttacacccattagta
acaactgcttttaacgctgactttgacggtgaccagatggctgttcacgtgccaatttct
aaagaagcagttgctgaagctagagcaattatgttagcttcttgacatatcttaggtcca
aaagatggtaagccagtagctactccaacccaagatatggtattaggtaactactactta
accactgaaaaacgtaatgaaaaaggtgaagggttaatcttctcagactttgatcaagta
atcttagcttatgaagctaaacaagtatcaattcacgctttaattgggttatcaaccaaa
tgtttaacaaaaaaaccatttgctaaacaagggatcgtaattacaactgttggtaaagcg
atcatgaactcaattatgcctgaagagatggcttatctaaacgatggtgataatttatta
gaacttgatgaatctaatatcgtttttgctggtgaagatttcaagcaaaaactagctaaa
cgcccactttacaaaccattcggcaaaaaaacattatctaagattattgagattctttat
aagaatttcccacttcaaaaagtgccacaagttcttgataagatcaaagaatttggtttc
aaatactcaacactatcatcaacaacaatctcagtctttgatatcccaagatatgataac
aagcaagaatacattactaaagctaatgagatgattgctaagctaaaacacatgtatcaa
aaaggattactaactgatgatgaacgttatacgaaagtaattcgtttatgagctgatgtt
aaagataatgtatctagagatattaaagagatcattacccgtcctgagtataaagaaaac
tcaatcgtggtgattgctgactctggtgctagaggtaatatctcaaacttcactcagtta
tttgggatgagaggattgatgtctaagtcatataactatgaccaaaagatcaaatcacaa
gtaatccgtgatacgattgaagttccaattaaacactcgtttattgaaggattaacgatt
aatgaatacttcaactcttcttatggggcacgtaaggggatgactgatattgcgatgaag
acatcaaaatctggttatatgactagaaaattagttgatgcagcgcaagaagtgatcatt
aatgattctgactgtaacaccaataagggaatcgtggtatcaacgattaccaactcttta
gatggtggggtcgttgaaactttaagtgaaagaatcgttactagatatacgatcgaccca
atttatgatgaaaaaactaaagaactattagttgatgctgatacactaattactagtgag
ttagctgaaaagattgctaaagcaaacgtaactaaagcactaattcgttcaccgatttac
tgccaatcaactaaagggttatgtcagaagtgttttggtaatgacttaactacaaacgac
cttgttcagattggaactgcgatcggggtgattgctgcgcaatcaatcggtgaaccagga
actcagttaacaatgagaacgttccacactggtggtacggcaaatgaaggtaatattact
caagggtttgaacgactaaaacagatctttgatgtagtctcaccaaaagaatgagaatta
gctacgattgctgaaaatgaaggggttgttgaatcgatcacttcagatgcaactgctaga
atcattcgcattaaaaccagattagaagctgaagaataccgtgttccgtttgatgctgta
atctcagttaaccctaaagatgttgtgtacccaggttctaaactaactgaaggttcgatc
gacatcaagcacttgttacgggttgctgggattgaaacagtaagacagtacttcttagaa
gaagtgcaaaaagtttatcgtttacaagggattgaaattgctgataagtacgttgaagta
acgatcagacaattaacaaacaaacttcaagtaatcgatgttggtgattctgattatttc
gtgggtcaaactgttgatatcaacaaatttagaaaagaagtgacgaatatgttaatcgcc
aacaaacgcccaccagtagcaattaaccaagtatttgggttagatgaagctccagctaag
actggttcattcctatcagcagcttcattccaagacaccaaaaagatccttactgatgct
gctgtaaaaaatcagattgactacttagttggtctgaaagaaaacgtgatcttaggtaac
ttaattccagctggtactggatttatgagttctgaagagatcattaaagctggtgaagaa
gctttagaaaaagaatattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system