KEGG   Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__0062
Entry
MGMSRv2__0062     CDS       T02960                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mgy  Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MGMSRv2__0062 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgy03021]
    MGMSRv2__0062 (rpoA)
   03400 DNA repair and recombination proteins [BR:mgy03400]
    MGMSRv2__0062 (rpoA)
Enzymes [BR:mgy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MGMSRv2__0062 (rpoA)
Transcription machinery [BR:mgy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MGMSRv2__0062 (rpoA)
DNA repair and recombination proteins [BR:mgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MGMSRv2__0062 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211 IDH
Other DBs
NCBI-ProteinID: CDK97277
UniProt: V6EW31
Position
56884..57900
AA seq 338 aa
MIQKNWQELIKPSKLQVEPGADAARVATVIAEPLERGFGMTLGNSLRRILLSSLQGAAVT
AIQIEGVLHEFSSVPGVREDVTDIILNIKNLGLRMHGEGPKRMQLRASGPGEVKAGMIEA
GHDIEIMDPDLVLCTLDQGAKLNIEFTVETGKGYVPASQNRTEDSPIGLIPIDAIFSPVK
KVAYKVENTRVGQVTDYDKLSMVLETNGAVTPDDAVALAARILQDQLQLFINFDEPTHVV
EEEKKDELPFNKNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLSHMGLHLGMEIPNWPPENIEDLAKKLEEPY
NT seq 1017 nt   +upstreamnt  +downstreamnt
gtgattcagaagaactggcaggaattgatcaagccctccaagctccaggtcgagcccggt
gccgacgctgcccgcgtcgctaccgtgattgccgaacccctcgaacgcggcttcggcatg
actttgggcaacagcttgcgccgcattttgctgtcctcgcttcagggtgccgcggttacc
gccatccagatcgagggtgtgctgcatgagttttcgtccgttccgggtgtgcgggaagat
gtcaccgacatcatcctgaacatcaagaatttgggcctgcgcatgcatggcgaagggccg
aagcgtatgcagctgcgggcctccggccccggcgaagtcaaggccggcatgatcgaagcg
ggtcatgacatcgagatcatggaccccgatctggtgctgtgcaccttggatcagggcgcc
aagctgaacatcgaattcacggtggaaaccggcaagggctatgtgccggcgtcgcagaac
cgcaccgaggattcgcccatcggcctgatccccatcgatgccatcttctcgccggtgaag
aaggtcgcctacaaggtggaaaacacccgcgtcggccaagtcaccgattacgacaagctg
tccatggtgctggaaaccaacggcgccgtcactcccgatgacgcggtggctctggccgcc
cgcatcctgcaggaccagttgcagctgttcatcaacttcgacgaaccgacccatgtggtc
gaggaagagaagaaggacgaactgcccttcaacaagaacctgctgcgcaaggtggacgag
ctggaattgtcggttcgttcggccaactgcctgaagaacgacaacatcatctatatcggc
gatctggtgcaaaagaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcc
ctgaacgagatcaaggaagtgctctcgcatatgggtctgcatttgggcatggaaattccc
aattggccgccggagaacattgaagatctggctaagaagctggaagagccctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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