KEGG   Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__1081
Entry
MGMSRv2__1081     CDS       T02960                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mgy  Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MGMSRv2__1081 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgy03021]
    MGMSRv2__1081 (rpoZ)
   03400 DNA repair and recombination proteins [BR:mgy03400]
    MGMSRv2__1081 (rpoZ)
Enzymes [BR:mgy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MGMSRv2__1081 (rpoZ)
Transcription machinery [BR:mgy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MGMSRv2__1081 (rpoZ)
DNA repair and recombination proteins [BR:mgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MGMSRv2__1081 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: CDK98296
UniProt: V6F203
Position
1127947..1128333
AA seq 128 aa
MARVTVEDCVTKVPNRFELVLIAAQRARDISTGGRITVERDNDKNPVVALREIAEDTVEL
DHLRNALVTGLQKHVEVDEPEEDELEAFMPENDMGFENIASDEDLEDGGMTVTDDPMDFA
GDLPDGDE
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcccgcgtaacggttgaagattgcgtcactaaggttcccaaccgctttgagctggtt
ttgattgcggcgcagcgcgcccgcgacatctcgaccggtggccgcatcacggttgaacgc
gacaacgacaagaatccggtggtcgccctgcgcgaaatcgccgaggacacggtcgaactg
gaccatttgcgcaacgccctggtcaccggcctgcaaaagcatgtcgaagtggacgagccc
gaggaagacgaactggaagccttcatgccggaaaacgacatgggcttcgagaacatcgct
tccgatgaagacctggaagatggcggcatgaccgtcaccgatgatcccatggacttcgcc
ggcgatctgcccgacggcgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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