KEGG   Mannheimia haemolytica D171: J450_05040Help
Entry
J450_05040        CDS       T02747                                 

Definition
5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mham  Mannheimia haemolytica D171
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:mham00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    J450_05040
Enzymes [BR:mham01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     J450_05040
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     J450_05040
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1069049..1069873)
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWAVSPELSQMAGAKITAVERRAKYLI
IRTDKGDILVHLGMSGSLRILSQTADIAFGKHDHIDLVTTNGTILRYNDPRKFGCWLWAE
KAEDHELLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVGVGNIYACESLFM
AGIHPELAAQNLTKKQCERLVKTIKEVLTKAIIQGGTTLKDFIQPDGKPGYFSQVLQVYG
RKGEACNDCGKTIETKVIGQRNTYFCPKCQRLPK
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaagttgaaaccagcgttcgtggtgtatcgccctatttggttggg
caaactattgaacaaatcatcgttcgtcagccaaagttacgttgggcggtgagtcctgaa
ttaagccaaatggcaggggcaaaaattaccgcagtagaaagacgtgccaaatatctgatt
atccgcaccgacaaaggcgatattttggtgcatctaggaatgtccggctcgctcaggatt
ttgtctcaaaccgccgatatcgctttcggtaagcacgaccatatcgatttagtcaccacc
aatggcacaattttacgctacaacgaccctcgcaaattcggttgttggctatgggcagaa
aaagcagaagatcacgaactgttgcgtaaactcgggcctgaaccgctttcaaacgatttc
acagcagattacttatttgcaaaaagccgcaaaaaaacgaccgcttgtaaaacctttatt
atgactaatgaagtggttgttggggtggggaatatctatgcgtgcgaaagtttatttatg
gcaggcattcaccctgagcttgcagcacaaaacctgactaaaaaacagtgcgaacgttta
gtaaaaaccatcaaagaagtactaacgaaagcgattattcaaggcggcacaacactgaaa
gattttatccaacctgatggcaaaccgggctatttctctcaagtgttgcaagtgtatgga
agaaaaggggaagcctgtaatgactgcggaaagacaattgaaaccaaagtaatcgggcag
cgtaatacctatttttgcccgaagtgtcagagattgccgaaataa

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