KEGG   Marinobacter nauticus ATCC 49840: MARHY0391
Entry
MARHY0391         CDS       T02083                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho; polarity suppressor
  KO
K03628  transcription termination factor Rho
Organism
mhc  Marinobacter nauticus ATCC 49840
Pathway
mhc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MARHY0391 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhc03021]
    MARHY0391 (rho)
   03019 Messenger RNA biogenesis [BR:mhc03019]
    MARHY0391 (rho)
Transcription machinery [BR:mhc03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MARHY0391 (rho)
Messenger RNA biogenesis [BR:mhc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MARHY0391 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT Spore_III_AA AAA AAA_25
Other DBs
NCBI-ProteinID: CCG93892
UniProt: H8WDM4
Position
427238..428500
AA seq 420 aa
MNLTELKQKSVPELLDIAQEMGLDNLARSRKQDVIFTILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKDGERYFALLKVNEIN
FDKPDNARNKILFENLTPLFPQERLMLEAGNGSTEDLSSRVLDLVAPIGKGQRGLIVSPP
KAGKTLLMQGIAQSITRNNPECHLMVLLIDERPEEVTEMQRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNVEEGGSLTILATALVNTGSKMDEVIYEEFKGTGNMEVHLDRRIAEKRVYPAINI
RSSGTRREDLLMSEADIQRVWILRKLLHSMDDDTAAIEFLLDKLKDTKTNDEFFQSMKRR
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaatcttactgaactcaagcagaaatccgtgcccgaattgctcgatatcgcgcaagaa
atgggcctcgacaacctggctcgttcgcgcaaacaggatgtgatcttcaccatcctgaaa
aaacacgccaaaagcggcgaagacatttacggtgacggtgtactggagattctgcaggat
ggtttcggcttcctccgctccgccgatgcctcatacctggccgggccggacgatatttac
gtttcccccagccagattcgccggttcaacctgcgtaccggcgacaccatcgcgggcaag
atccgtcctccgaaagacggcgaacgttattttgccctgctgaaagtcaacgagatcaac
tttgacaagccggacaacgcccgcaacaagattctgttcgagaacctgacaccgctgttc
cctcaggaacggttgatgctggaagccggtaacggcagcaccgaggatctctcatcccgg
gttctggatctggtagcgccgataggtaaaggccagcgggggctgatcgtatccccgccc
aaggctggtaaaacgctgctgatgcagggtatcgcccagtcgattacccgcaataacccg
gaatgccacctgatggtgctgctgattgatgagcgcccggaagaagtgactgaaatgcag
cgtaccgtgcgcggcgaagtggtggcctccacctttgacgagccgcccgcccgtcacgtc
caggtggccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaagatgtg
gtcattctgttggactccatcacgcgtctggcccgggcctacaacacggtgattccgtcc
tccggcaaggtactgaccggcggtgttgatgctcacgcgctggaaaagcccaagcgtttc
tttggtgctgcccgtaacgtggaagaaggcggaagcctgaccattctcgccacggcgctg
gtgaacaccggttccaaaatggacgaagtgatctacgaggagttcaagggcaccggtaac
atggaggtgcatctggaccgacggattgcagagaagcgggtgtacccggccatcaacatt
cgtagctccggcactcgccgcgaagacctgttgatgtccgaagccgacatccagcgtgtt
tggattctgcgcaaattgctgcactccatggacgacgataccgccgccatcgagttcctg
ctggacaagctcaaggacaccaagaccaacgacgagttcttccagtccatgaagcgtcgg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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