KEGG   Marinobacter nauticus ATCC 49840: MARHY2372
Entry
MARHY2372         CDS       T02083                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
mhc  Marinobacter nauticus ATCC 49840
Pathway
mhc03030  DNA replication
mhc03430  Mismatch repair
mhc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MARHY2372 (dnaE)
   03430 Mismatch repair
    MARHY2372 (dnaE)
   03440 Homologous recombination
    MARHY2372 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhc03032]
    MARHY2372 (dnaE)
   03400 DNA repair and recombination proteins [BR:mhc03400]
    MARHY2372 (dnaE)
Enzymes [BR:mhc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MARHY2372 (dnaE)
DNA replication proteins [BR:mhc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MARHY2372 (dnaE)
DNA repair and recombination proteins [BR:mhc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MARHY2372 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon tRNA_anti_2 HROB
Other DBs
NCBI-ProteinID: CCG95845
UniProt: H8W8L7
Position
complement(2413490..2416978)
AA seq 1162 aa
MTMANTFVHLRVHSEYSMVDGLVRVKPLISRVAELGMPAVGLTEQSNMCSLVRFYKAAMG
AGVKPIIGADIWLENPDEPETPFRLTLLARDNDGYLNLTEIISQGYTEGQRYGKPIVQKT
WLESRAKGLIVLSGAKMGDVGKALLAGKPELARERADYWRNLYPDSYYLELQRTGRAGDE
DCLHMSVELAAELGLPVVATNDVHFLEADDFEAHEARVCIGESRTLDDPRRDRRFSDQQY
LRSAEEMIELFSDIPEAVENTVEIARRCSVKVRMGEYFLPNYPIPDGMTMDEYFRHVSEE
GLEARLAKTLSKDDPEYDQKREEYYKRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVP
VGPGRGSGAGSLVAYALLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDY
TAQKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLNKAIEQ
EPQLKEFLEQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSL
VTQFDKGDVEDAGLVKFDFLGLRTLTIIKWALNMINPRRQQRGEGELDISAIPLDDKPSF
DMLKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHG
RQPLSYPHPDYQYQGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKP
EEMAKQKAIFLDGCENNGIDKTLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAH
YPAEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSAYTFTVNDQGQIVYGLGA
IKGLGEGPIESIVEAAKAGPFQDIFDFCRRVDLKKVNKRAMEALIRSGAMDKLGADRAKL
MASIDKAIQQADQQSRNDAAGMVDMFGEMLEGGGDDEDTYADVAHVREWPEKERLKGEKD
TLGLYLTGHPFDEYEREVRRFVRCSIADLKPNKSPQRVAGLVVAQRTMKTKTGSTMCFIT
LDDRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVATARQ
QFSRGIKLALRSEQLQNGLLDKLDDTLRPFRSEGSPVWIEYRSAEASTRIELGESWRVQP
DDTLLFELKHLVGDQSVELVYD
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgaccatggcaaacacctttgtacacctgcgcgttcactccgaatactccatggtggat
ggcctggttcgggtcaaaccgttgatcagccgggtcgcggaactgggcatgccggcggtt
ggcctgaccgaacagtccaacatgtgctcactggtacgtttctacaaggccgccatgggc
gcgggcgtcaagcccattatcggtgccgatatctggctggagaatccggatgagcccgaa
accccgttccggctgaccttgctggcccgagacaacgatggttacctgaacctgacggag
atcatttcccagggctataccgaaggccagcgctacggcaagccgattgtccagaaaacc
tggctggaatcccgtgccaagggcctgattgtgctgtccggcgccaagatgggggacgtc
ggcaaggccttgctggccgggaagccggaactggccagggagcgtgcagactactggcga
aacctctatcccgacagttattacctggagctgcagcgcacagggcgggccggtgacgag
gattgtctgcacatgagtgtggagttggcggctgaactcggtttgccggtggtggcgacc
aatgacgttcacttccttgaggcggatgattttgaagcccacgaagcccgggtctgcatc
ggagaaagccggactctggacgatcccaggcgggatcgtcggttcagcgaccagcaatat
cttcgcagcgccgaggaaatgatcgagctgttctcggacattccggaagccgtggaaaac
accgtggaaatcgccaggcgctgttcggtgaaggtccggatgggcgaatactttctgcct
aattaccccattccggacggtatgaccatggacgaatattttcgccatgtgtcggaagaa
ggactggaagcccggctggcgaagaccctgagcaaggacgatccggagtatgatcaaaag
cgtgaagagtattacaagcgcctgaagtttgagctggatatcattatccagatggggttc
cccggctacttcctgatcgtaatggacttcatcaagtgggccaagaacaacggcgttccg
gtagggccgggccggggttccggtgccggctcgctggtggcgtatgcgctgctgatcacg
gacctggatccattggaatacgacctgctgttcgagcggttcctgaacccggagcgggtc
tccatgcctgacttcgacgtcgacttctgcatggaaggccgggaccgcgtcatcgactac
accgcccagaaatacggccgggaagcggtatcccagattattaccttcggtaccatggcc
gccaaggcggtggtccgtgatgtggcccgggtgcagggaaaatcctacggtctggcagac
aaactctccaaactgatcccctttgaagtgggcatgaccctgaacaaggcgatcgagcag
gagccgcagctcaaggaatttctggagcaggacgaagaagcccaggaaatctgggagatg
gctctgaagctggaaggtgtgtgccgtaacgccggcaagcacgccgggggcgtggtgatc
gcacccaccaagatcaccgatttttcgccgctttactgtgatgacgaaggcggcagtctg
gtgacccagttcgacaagggcgatgtggaagacgccggcctggtgaaatttgactttctg
gggctgcgaaccctgaccatcatcaaatgggcactgaacatgatcaacccgcgccggcag
cagcgtggggaaggcgagctcgacatcagcgcgattccgctggacgacaagccctctttt
gacatgctcaagaaagcagagaccacggcggtattccagttggaatcccggggtatgaaa
gaccttatccgccgcctgcaaccggactccctggaagacatgatcgccctggtcgccctg
tttcggcccggtccgctgcagtccggcatggtggacgactttatcgaccggaagcacggt
cggcagccgttgtcttatccgcatcccgattaccagtatcagggcctgaagccggttctg
gagcccacctacggggttatcctgtaccaggagcaggtcatgcagatcgctcaggtgatg
gcgggctatacccttggcggcgccgacatgctgcgccgggccatgggtaagaaaaagccg
gaagaaatggccaagcagaaagccatcttcctggacggttgtgaaaacaacggcatcgac
aagaccctggcggaaaacatctttgacctggtggagaaattcgccggttacggcttcaac
aaatcccactctgccgcatacgcactggtgtcgtaccagaccctgtggctgaaagcacac
tatccggccgaattcatggctgcggttctcaccgccgatatgcagaacaccgacaaggtg
gtgacgctggtggaagagtgccgcaacatgaagctggacttgctggtgccggacgtcagc
cggtccgcttatacctttaccgttaacgatcagggccagattgtgtacggcctgggcgca
atcaagggcctgggtgaaggtcccatcgagagcattgtagaagcagccaaagcaggcccc
ttccaggatatctttgatttctgccgccgggtggatctgaaaaaggtcaacaagcgggcc
atggaagccctcattcgctctggcgccatggataaactgggtgccgatcgcgccaagctg
atggccagtatcgacaaggccatccagcaggcagaccagcagtcccgcaacgatgccgcc
ggcatggtggacatgttcggagaaatgcttgagggcggtggcgacgatgaagacacctat
gcggacgttgcccacgttcgggagtggccggagaaagagcgcctgaaaggcgaaaaggac
actctgggcctgtaccttaccggccacccctttgatgaatacgaacgggaagtgcgtcgg
tttgtccgttgctcaatcgccgatctgaagcccaacaaatcgccccagcgggtggccggg
ctggtggtggcccagcgcaccatgaagaccaagaccggctctaccatgtgcttcattact
ctggatgatcgcagcgcccggattgaggctaccctgttttccgaggccttcttcgagaac
cgggagttactgcagtcggatcaggtaattgtggtggaaggacaggtcagccatgatgat
tactccggccagatgaaaatgcgggtcagcagcgtgatggatgtggcgaccgcccgtcag
cagttcagccggggtatcaaactggcgttgcgctcagagcagttgcagaatggacttctg
gacaagctggacgataccctcaggccgtttcgcagtgaaggcagcccggtctggattgag
taccgcagtgccgaggccagcacccgtattgaactgggtgaaagctggcgggtacagcca
gacgacacactgttgttcgagctgaagcacctggtgggcgaccagtctgtggaactggtc
tatgattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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