KEGG   Megamonas hypermegale: MHY_03620
Entry
MHY_03620         CDS       T02593                                 
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
mhg  Megamonas hypermegale
Pathway
mhg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MHY_03620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhg03019]
    MHY_03620
   03400 DNA repair and recombination proteins [BR:mhg03400]
    MHY_03620
Enzymes [BR:mhg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MHY_03620
Messenger RNA biogenesis [BR:mhg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MHY_03620
DNA repair and recombination proteins [BR:mhg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MHY_03620
SSDB
Motif
Pfam: RQC DEAD Helicase_C RecQ_Zn_bind ResIII pKID
Other DBs
NCBI-ProteinID: CBL05504
Position
complement(274780..276330)
AA seq 516 aa
MMLSKARQILQKFYGYEDFRPGQKKVVESLLNKNDTVAIMPTGAGKSICFQIPALLFEGV
TLVISPLISLMKDQVDSLRQLGIAAVYINSSVSKAQLYKDLQDISAGFYKIIYIAPERLT
SEYLPDSFKNLNISMVAVDEAHCLSQWGHDFRPSYRNILNFTNSLRIKPIISAFTATATP
EVKTDIINLLGLKQPNVFVTGFDRPNLYFSVLRGEVKDKFVIDYVKKHQDEAGIIYVGTR
KDVDALQVLLEIKGIKAGRYHAGMTDEERNQMQEDFLYDNLSVMVATNAFGMGIDKPNVR
YVIHYNMPKNMEAYYQEAGRAGRDGLSGNCILLYSPQDTQLQKFLISKSTESEIRQQLEY
KRLQSMVDYCHTPQCLRAFILHYFGEFDVEEHCDNCSNCKLEGELIDITIDAQKVLSCVY
RMHERFGVKMIAEVLKGSKSAKVKQFNFERLSTYGLMKERKLKDISDLILRLSAMQYLDI
TESQYPVVTLNELSWQVLRGQKKVWQKMVIVKKSQG
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgatgctgagtaaagcaagacaaatactacaaaaattttatggatatgaagactttcga
ccagggcagaaaaaagtagttgaaagtttattaaataaaaatgatacagtggcgattatg
cctacaggtgcgggaaaatctatttgttttcaaatccctgcattattatttgaaggggta
acacttgttatatcgccacttatttctttgatgaaagaccaagttgatagtttgcgtcag
ctagggatagcggcagtatatattaatagttctgtcagtaaggctcaattatataaggat
ttacaagatatatctgctggtttttataaaattatttatatagcaccagagcgattaaca
tctgaatatttaccagatagttttaaaaatttaaatattagtatggtagcagttgatgaa
gcgcattgtttatcacaatggggacatgattttcgtcctagttatcgcaatatcttaaat
tttactaattcactgcgcattaagccgattatcagtgcttttacagcaacagctacacca
gaggtaaaaacagatattataaatttattgggacttaaacaacctaatgtatttgtaact
ggttttgatagaccaaatttatatttttccgtattaagaggagaagtgaaagataaattt
gtcatagattatgtaaaaaaacatcaagatgaagctggaattatctatgtgggcactaga
aaagatgtagatgctttgcaagttttattggaaataaagggcattaaagcaggtagatac
catgccggtatgacagatgaggaaagaaatcaaatgcaagaagattttctctatgataat
ctttctgtcatggtggcgacgaatgcttttggtatgggtatagataagccaaatgtacgc
tatgttattcattataatatgccgaaaaatatggaagcgtattatcaagaagcaggtaga
gcaggtcgcgacggactttcaggaaattgtattttactgtatagtccgcaagatacacag
cttcaaaagtttttgataagtaaatctacagaaagtgaaattcgccaacaattagaatat
aaaagattgcagtctatggtggattattgtcatacaccgcaatgtctaagagcatttatc
ttgcattattttggtgaatttgatgtagaagaacattgtgataattgtagtaattgcaaa
ttagaaggcgaattaatagatattacaattgatgcacaaaaggttttatcgtgtgtctat
cgtatgcatgaacgcttcggcgtgaaaatgatagctgaagtcttaaaaggttcaaaaagt
gcgaaagtaaaacaatttaattttgagcgtttatctacgtatggcttgatgaaagagcga
aagctaaaagatatcagtgatttaattttgagacttagtgctatgcaatatttagatatc
acagaaagccaatatccagtggttactttgaatgaattgtcatggcaagtgcttcgcggt
caaaaaaaggtttggcaaaagatggtaattgttaaaaaaagccaaggctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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