KEGG T01990: Mhar

Methanosaeta harundinacea: Mhar_1487

Entry

Mhar_1487 CDS T01990

Definition

DNA ligase

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mhi Methanosaeta harundinacea

Pathway

mhi03030	DNA replication
mhi03410	Base excision repair
mhi03420	Nucleotide excision repair
mhi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mhi03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mhi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mhi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mhi03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

386002175

NCBI-GeneID:

12510656

UniProt:

G7WP10

Position

complement(1610761..1612443)

AA seq 560 aa
MTSFESFAELCARIEEIGGSIEKADLLASFLRDLEEEELSVVPSFVMGSPFPASSDLLLG
VGPSTLYDALSKAFGAAPSEVQELLRRTGDVGAVAAELAKKGRSSTLSTFLEGERLTILE
VHSRFLLIARASGRRSQTAKMKHLRYLFSEAGATEARYMARLALEDMRIGVGEGIVRDAV
AKAFGISPEEVERGYNFTSDLGLVARQAKEGRLQELTIEIGRPIKMMLAQLGSGIAGSVA
EMGTAAVEVKYDGSRVQIHKRGEEVEIFSRRLERVTRSLPEIVSFVKEGVRAEAAILDGE
AVARGEDGRPLPFQEILKRFRRKYRVEGAAKRIPLELMLFDLIYLNGRVLIDEPLRERRR
LLESVADEKILAGQKVTDDPEEVAGIYEEAIAEGHEGVMLKSPESPYAPGKRGKNWLKIK
PVMETLDLVVIGARWGEGRRATFFGSYRLASPDPETGRLEDVGWVATGITDEMLAELTEL
FRDLVLVAGEGMEVEVKPEVVFEVAFEEIQKSKSYSSGYALRFPRLVRIRDDKAVEEADT
LDRVAGLYATQRGRNGRSSG

NT seq 1683 nt +upstreamnt +downstreamnt
atgaccagcttcgaaagcttcgcagagctctgcgcgaggatcgaggagatcggcggctcc
atcgagaaggccgacctcctcgcctccttcctccgggatctggaagaggaggagctctcg
gtcgtcccctcttttgtgatggggtcccccttcccggcgagctccgaccttctcctgggg
gtgggaccgagcaccctctacgacgccctctccaaggccttcggggcggccccctccgag
gtccaggagctcctccggaggacgggagacgtgggggcggtggcggcggagctggcgaag
aaggggaggtcctccaccctctcgaccttcctggagggggagaggctcacgatcctcgag
gtccattcccggttcctcctcatcgcccgggcatcggggcggaggagccagaccgccaag
atgaagcacctccgatacctcttcagcgaggccggggcgacggaggcgaggtacatggcg
aggctcgccctggaggatatgaggatcggggtcggcgaggggatcgtccgggacgccgtc
gccaaggccttcggaatatcgccggaggaggtggagcgggggtacaacttcaccagcgac
ctcggcctagtagcccggcaggcgaaggagggtcggctccaggagctgacgatcgagatc
ggtcgacccataaagatgatgctcgcccagctcgggtccgggatcgcagggtcggtggcg
gagatggggacggcggccgtcgaggtgaagtacgacgggtcccgggtccagatccacaag
aggggagaggaggtggagatcttctcccgccggctggagagggtgacccgctccctcccc
gagatcgtatccttcgtaaaagagggggtccgggcggaggccgccatcctcgacggggag
gcggtggcccggggcgaggacggaaggcccctgcccttccaggagatcctgaagcggttc
cggaggaagtacagggtcgagggggcggcgaagaggatccccctggagctgatgctcttc
gatctcatctatctcaacggccgggtcctcatcgacgagcccctccgggagaggagaagg
cttctggagtcggtggcggacgaaaagatcctagcaggccaaaaggtgaccgacgatccc
gaggaggtggccgggatctacgaggaggcgattgcagaaggccacgagggcgtcatgctg
aagagccccgagtccccctacgcccccggtaagaggggtaagaactggctgaagataaag
ccggtgatggagaccctcgacctcgtcgtcatcggagcccggtggggggaggggaggagg
gcgaccttcttcggctcctaccggctggcatccccggacccggagaccggccgcctcgag
gacgtggggtgggtggcgacggggatcaccgacgaaatgctcgccgagctgacggagctc
ttccgcgacctcgtcctcgtcgccggagaggggatggaggtggaggtgaagcccgaggtg
gtcttcgaggtggccttcgaggagatccagaagagcaagagctactcctccggctacgcc
ctccggttccccaggctcgtccggatcagggacgacaaggccgtggaggaggcggacacc
ctcgaccgggtggccggcctttacgccacccagcggggtaggaacggcagatcgtcgggc
tga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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