KEGG   Mesomycoplasma hyopneumoniae J: MHJ_0009
Entry
MHJ_0009          CDS       T00260                                 
Name
(GenBank) conserved hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mhj  Mesomycoplasma hyopneumoniae J
Pathway
mhj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MHJ_0009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhj03019]
    MHJ_0009
Messenger RNA biogenesis [BR:mhj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MHJ_0009
SSDB
Motif
Pfam: Thioredoxin RNase_J_C Thioredoxin_2 TXD17-like_Trx Thioredoxin_9 RMMBL Thioredoxin_8 ArdA AhpC-TSA
Other DBs
NCBI-ProteinID: AAZ44103
LNCC_Brazil: MHJ0009
UniProt: Q4AAU0
Position
9193..11214
AA seq 673 aa
MAKISFFALGGQDENGKNCYILEIDDNIFIINSGAKIPLDSSVGVDTIIADFTYLEENQH
KIRGVFITDAKNESFSALPWLIMKLKKIKIYSSFFTKALIIERIHKYRLSESAFEVIPIT
SELKINEKISVSPFPVAGSMPGTIGFCFHTEDGGIVFMANYVVGNLGVYGETNFELIKKI
SQNPKGILMFISDSGKSNLPGKAINKLFAKNFLENFFLKADKNSRIVVSAYDEEMVSIQE
IIDLSIKFNRQITAYGKKYDKLYDMIYKLDKLTTNKLKKLPTFFDYKYANKQKNSVILIT
SSPERICYRFNRILENDDVYFKLKKSDYVIMLTPPINGMEQLYAKVLDQIAKSTTSIVDI
SESDFGLARPYKEDISEMIQLLKPKYFLPIQGLYRYLIVASNIAVANKVKRQNIIVLQNK
RSANFIDGSLFSRKKISKGEEEIYVSGFGIGDVCFRVLKERDALSRNGLIIVSFLFDPIE
KKIFSTPEITTYGILSRENREAYYDIIRKIIFNNFSNIKKINDKILKELQQKSQKNIKRK
LLRIFDKEPSVSVLIHNIYPEVKKMKKMLWKQAENELKTGVVYLEFAADWCNDCKMQEPV
NEELSKYFKDRSDVKLIKVDAEESKLFRQKGTKYEVLFVPTHFIFKDGQILFKQFNYVPA
EVLIEKIEKALNS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggctaaaatcagtttttttgcacttggtgggcaagacgaaaatgggaaaaattgttat
attttagagattgacgataatattttcataattaattcaggggcaaaaataccactggat
agttcagttggtgtcgatacaattattgcagattttacctatcttgaggaaaatcaacat
aaaatcaggggtgttttcatcactgatgctaaaaatgaatcattttctgccttgccgtgg
ttgataatgaaattgaaaaaaatcaagatttatagctcttttttcacaaaagcactaatt
attgaacgaatccataaatacagactgtctgaatctgcttttgaagtaattcctataact
tctgagctaaaaatcaatgaaaagatatcagtttctccttttccagttgcgggttctatg
cccggaacaattggtttttgctttcacacagaggatggcggaatcgtttttatggctaat
tatgtcgttgggaatttaggtgtttatggggagacaaattttgaattgatcaaaaaaatt
agtcaaaatccaaaaggcattttgatgtttatttctgattcaggtaagtcaaacttacct
ggaaaagcaataaataaactttttgcaaaaaattttttagaaaattttttcttaaaagcc
gataaaaactcgcgaattgtggtctcagcttacgatgaagaaatggtttcaatacaagaa
attattgatctttcgataaaatttaaccgccaaattaccgcttatggtaaaaaatatgat
aaattatacgatatgatctacaagttagataagctaacaactaataaattaaagaaatta
ccgacattttttgactataaatatgcaaataaacagaaaaattcggtgattttgattact
tcaagtcccgaaagaatttgttatcgctttaatagaattcttgaaaacgatgatgtttat
tttaaattaaaaaaatctgattatgtgataatgttgacccctccaatcaacggaatggag
caactttatgcaaaagttttagaccagattgccaaatcaacaacaagtattgttgatatt
tcagaatcagattttggacttgctcgcccttataaagaagacatttctgagatgattcag
cttctaaaaccaaaatattttcttccaattcaaggtttatatcgctacttaattgtggcc
tcaaatatcgcggttgcaaataaagtcaaacgacaaaacattatcgttttgcaaaataaa
aggtctgctaatttcattgatggtagtttattttcaagaaaaaaaatttcaaaaggtgag
gaagaaatttatgtttctggttttgggattggtgatgtttgctttagagtactaaaagaa
agagatgctctgtcacgcaatggtttgattattgtttcttttttattcgatccaatcgaa
aaaaaaattttttcaactccagagattacgacatatggaattttaagtagggaaaatcgg
gaagcttactatgatattattagaaaaattatttttaataatttttctaatataaaaaaa
ataaatgataaaatactaaaggaattgcaacaaaaaagtcaaaaaaatataaagcgaaaa
cttttaagaatttttgacaaggaaccaagcgtttcagttctaattcataatatttatcca
gaggtaaaaaaaatgaaaaaaatgctatgaaaacaagccgaaaacgaattaaaaacaggc
gtagtttaccttgaatttgcagcggattggtgtaatgactgtaaaatgcaagagcctgta
aatgaagaattaagcaaatattttaaagaccgaagtgatgtaaaattaattaaagttgat
gcggaagaatccaaacttttccgtcaaaaagggacaaaatatgaagtactttttgtccca
actcattttatttttaaagatggacaaattctttttaagcagtttaattatgttccagcc
gaagttttaattgaaaagattgaaaaagcacttaattcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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