KEGG   Mesomycoplasma hyopneumoniae J: MHJ_0533
Entry
MHJ_0533          CDS       T00260                                 
Symbol
polC
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
mhj  Mesomycoplasma hyopneumoniae J
Pathway
mhj03030  DNA replication
mhj03430  Mismatch repair
mhj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MHJ_0533 (polC)
   03430 Mismatch repair
    MHJ_0533 (polC)
   03440 Homologous recombination
    MHJ_0533 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhj03032]
    MHJ_0533 (polC)
   03400 DNA repair and recombination proteins [BR:mhj03400]
    MHJ_0533 (polC)
Enzymes [BR:mhj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MHJ_0533 (polC)
DNA replication proteins [BR:mhj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MHJ_0533 (polC)
DNA repair and recombination proteins [BR:mhj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MHJ_0533 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP HHH_6 RNase_H_2 DEDDh_C T2SSK HHH_3 Rv2179c-like
Other DBs
NCBI-ProteinID: AAZ44619
LNCC_Brazil: MHJ0533
UniProt: Q4A9F2
Position
complement(687922..692328)
AA seq 1468 aa
MNTKFRKFSQLINWSNPYDWDDVVIIEKTSAETVENVNDQSLKTQIFSAIFRKTTLPKFN
DLCAFIDLVQKTNRQSKFNCKIEFDFEIQQNYFTDQQLLEYLNGIMQGISKNKGFFNDKE
IIRANASRFKIIFSDAKSFEFMSKYEKKMRKIIKYFGLIHLDLDFILEEKPVIENKFNLD
LETVMRPLEYNFLANFSERNKKIIDFELIDLKFIRSHKNPNVQFDAQIYKISPIKTKTGG
LILKIFLNNNDYTEAVSVSKFLIKNQNYDLKVGDLVNIKAKIKDPTSRYKSNVDLNLYEI
KRIDSSIFFPNEKLDTAKIKRVEIAARTWKSTMDGISSAKEYVQHALKNGYLAIGIADLD
SVQAFPEFYNAIKSTNIKPIYGSTFSTYRSKIEKVINFNGKNYIFDKLKFVIFDLETTGL
SAFYNEIVEFGAVVLQNGIEIEKHQFFIKPTGKIPPAITKITGISQKMIDETAISWEIAL
EKITKIIKDSVLVAHNAAFDFSFLEQFFRQKAKKSLKNPIIDTLEVSRFLNPNEKSHSLK
NVAKRYEIEYDEEIAHRADYDAKILTTIWKNFLAELKSQNINDLTSLSEIKNSIFELRPE
KVFPKQLTIIAKNQIGIKKLYKLVSLANTENLISRPLIFYDHLQKDPDLLIGSGGPESLL
IQTMLYFGPKNVAEFAHIFDFIEIPPPSAFIHLVKREIFTKDQIEDMLKNLINLAKKLQI
PAVAIGDVRYCLPKEKIFYELYIYAKGVGGVNHVLFDHREKEREDFRNSHIFPEKHFFST
EELKKEFEFLEDQQLIEEIVVKNSNFVADLIENNIQIIKSGLYPPSFDNSEVKLKEFVYK
KAYEKYGRFLPKLIENRIKTELEPIINQGFHVVYWISKHIVTEAKSQGAIVDSRGSVGSS
IVAFLTGITDVNPLLPHYWCKKCSKVEFPKSQQFLSGYDLPDKNCLDCYKKMEKDGHNIP
FETFLGFNVEKVPDIDLNFSGQTQLKMHDFVRTLFGINKTFRAGTILTNAEKTVYGLARK
LGEYRARLDPKFDLNREVSYFTSAFLDFLATKAQGVKRTSGKHAGGIIVIPQNQEIEDFT
PINYPANNEKSDWKTTHFDYNALHDNLLKLDILGHDDPTILLHLEKLTNIKSDEIPKSDP
KILSLFRSCKELGISSDQILGEVTGTIGIPEFGTQFVRKMLQIAQVKSFADIVAICGLAH
GTGVWQDNAEKLILEKKHVINELISCRDDIMIYLLQKNIDHQVAFNIMENVRKGKGLTDQ
EKELLELKKVPSWYIESLQKIGYLFPKAHAVAYAMKAWKIAYFKLYHPLAFYSSYFSIRP
DVKDLETLIQPVEKIREKISILNKKRLESQKGIQQLSAKEKDLIQFLEISLELKSRGFEI
EKVSLEKSEAQEWIINKENNSLIPPFIAIDGIGDVNARKIVQARNLRPFSSIEDFEKRTE
TNSTSLKKLKELGIFDKISKRAQVNIFD
NT seq 4407 nt   +upstreamnt  +downstreamnt
atgaatacaaaattcagaaaattttcccaattaataaattgatcaaatccatatgactga
gatgatgtggtaataatcgaaaaaacaagcgcagaaactgtagaaaatgtcaatgatcaa
agcctaaaaacacaaatattttctgcaatatttagaaaaactacacttccaaagtttaat
gatttatgtgcatttatcgatttagttcaaaaaacaaataggcaatccaaatttaactgt
aagattgaatttgactttgaaattcaacaaaattattttactgatcaacaattattagaa
tatctaaacgggataatgcaaggaatatcgaaaaataaaggattttttaatgataaggaa
attataagagctaatgcatctcggtttaaaattattttttctgatgcaaaaagttttgaa
tttatgtccaaatatgaaaaaaaaatgcgaaaaattataaaatattttggactaattcat
cttgatcttgattttatacttgaagaaaagccagtaattgaaaataaattcaatttagat
cttgagactgtgatgcgcccacttgagtataattttttagcaaatttttccgaaagaaat
aagaaaataattgattttgaactaatagacttaaaatttatccgttctcataaaaatccg
aacgtgcaatttgatgctcaaatttataaaattagcccaataaaaactaaaacaggtgga
ctaattttaaaaattttccttaataataatgattatacagaggcagttagtgttagtaaa
tttttaataaaaaatcaaaattatgacttaaaagttggtgatttagtaaatattaaagcc
aaaataaaagatcctacatcacgttataaatcaaatgttgacttaaatttatatgaaatt
aaaagaattgattcttcaattttttttccaaatgaaaagcttgatactgccaaaattaaa
cgcgtcgaaatcgctgcgcgtacttgaaaatcaacaatggatggaatttcaagtgctaaa
gaatatgtccaacatgctctcaaaaatggttatttagcaattggaatcgccgatcttgac
tcagttcaggctttccctgaattttataatgcaataaaatcaactaacatcaagccaatt
tatggctccactttttcaacatatcgttcaaaaattgaaaaagttattaattttaacgga
aaaaactatatttttgataagttaaaatttgtgattttcgaccttgaaacaaccggactt
tcagctttttataatgaaattgttgaatttggtgcagtcgtattacaaaatggtattgaa
attgaaaagcaccaattttttattaaacctacaggaaaaatcccgcctgcaattacaaaa
atcaccggaattagccagaaaatgattgatgaaacggcaatttcttgggaaattgcactg
gaaaaaattacaaaaattatcaaagattcagttttagttgcccataatgctgcctttgat
tttagttttttagaacagttttttagacaaaaagcaaaaaaatccttaaaaaatccaatt
attgacacacttgaagttagccgttttttgaatccaaatgaaaaaagtcatagtttgaaa
aatgtagcaaaaagatatgaaattgaatatgatgaagaaattgcccaccgtgctgattat
gatgcaaaaattttaacaactatttgaaaaaactttttagctgagctaaaaagtcaaaat
attaatgatctaacctcactttctgaaataaaaaactcaattttcgagcttcgtccagaa
aaagttttcccaaaacaattaaccataattgctaaaaatcagataggaattaaaaaatta
tacaaactagtttcgctggctaatacagaaaatctaatttctcgaccattaattttttat
gatcacttacaaaaagatccagatttattaattggttcaggtggcccagagtcgcttttg
attcaaacaatgctttattttggccctaaaaatgttgcagaatttgctcatatttttgat
tttatcgaaattccgcctccaagtgcttttatacatttagtaaaaagagaaatttttact
aaagatcaaattgaagatatgttaaaaaatttaataaatttagcaaaaaaactccagatt
cccgctgttgcaattggcgatgttcgctactgtctgccaaaagaaaaaattttttatgaa
ctttatatttatgccaaaggtgtcggcggcgtgaatcatgtcctttttgatcatcgtgaa
aaagagcgagaagattttcgcaatagtcatatttttccagaaaaacactttttttcaact
gaagaattgaaaaaagagtttgaatttctagaagatcagcaactaattgaggaaattgtt
gttaaaaattccaattttgttgctgatctaattgaaaacaatattcaaattattaaatcc
ggcttatatccacccagttttgataattctgaggtaaaattaaaagaatttgtttataaa
aaagcctatgaaaaatatggcagatttttgccaaaattaattgaaaatcgcattaaaacc
gagctagaaccgataataaaccagggttttcacgtggtttattgaatttccaagcatatt
gtaactgaggctaaatcacaaggtgcaatagttgactcacgtgggtcagtaggttcttca
attgtggcttttctaacaggaattaccgatgtaaacccacttttacctcattattgatgt
aaaaaatgtagcaaagtggaatttcctaaatcccagcaatttttatcaggttatgatcta
ccagataaaaattgcttagattgttataaaaaaatggaaaaagatgggcataatattcct
tttgagacttttctaggatttaatgttgaaaaagttccagatattgatcttaatttttcg
ggccagactcagttaaaaatgcatgattttgttagaactttatttggaattaataaaact
tttcgggcgggaacaattcttacaaatgctgaaaaaactgtttatggtttagctcgaaaa
ttaggggaataccgcgctagacttgatccaaaatttgatcttaaccgtgaagtttcttat
tttaccagcgcttttcttgattttttagcaacaaaagctcaaggtgttaaacgaacatct
ggcaaacacgccggcggaattattgtaattccgcaaaatcaagaaattgaggattttacc
ccgattaactatcctgcaaataatgaaaaatcggactgaaaaacaacgcattttgactat
aatgcccttcatgataatctcttaaaacttgatattttagggcatgatgatccaactatt
ttgctccatttagaaaagttaacaaatataaaatccgatgaaattcctaaatctgatcca
aaaattctttcactttttagatcatgtaaagaattaggaattagttccgatcaaattctt
ggtgaggttacaggcacaattggtatcccggaattcgggacgcaatttgtaagaaaaatg
ttgcaaattgcacaagtaaaatcatttgcagatattgttgcaatttgtggtctagcacat
ggtactggggtctgacaagataatgctgaaaaactaattttagaaaaaaagcacgtaatt
aacgagctaatttcttgtcgggatgatattatgatctaccttttgcaaaaaaatattgac
caccaagttgcctttaatattatggaaaatgtccgaaaaggcaaggggctaacagatcag
gaaaaagaattactagaattaaaaaaagttcctagttggtatattgaatcactccagaaa
attggttatttattcccgaaggcgcacgcagttgcttatgcaatgaaggcatgaaaaatt
gcatattttaaactttatcacccgcttgctttttattcttcttatttttcaatccggcct
gatgttaaagatcttgaaactttaattcaaccagtagaaaaaattcgcgaaaaaattagt
attcttaataaaaaaagacttgaaagtcaaaagggaatccagcaactaagtgcaaaagaa
aaggatttaatccaatttttagagattagtcttgaacttaaatcccgtggatttgaaatt
gaaaaggtaagtcttgagaaatcagaagctcaggaatgaataatcaacaaagaaaataat
tcactaattccgccatttattgcaattgatggtattggtgatgttaatgctcgaaaaatt
gtgcaggctcgtaatttaagacctttttcatcaattgaggattttgaaaagagaaccgaa
acaaatagtacatcattaaaaaagctcaaggaattaggtatttttgataaaatatccaag
agggcgcaagtaaatatatttgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   LNCC_BRAZIL (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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