KEGG   Mesomycoplasma hyorhinis MCLD: SRH_04050
Entry
SRH_04050         CDS       T01945                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mhm  Mesomycoplasma hyorhinis MCLD
Pathway
mhm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mhm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SRH_04050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhm03021]
    SRH_04050
   03400 DNA repair and recombination proteins [BR:mhm03400]
    SRH_04050
Enzymes [BR:mhm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SRH_04050
Transcription machinery [BR:mhm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SRH_04050
DNA repair and recombination proteins [BR:mhm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SRH_04050
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_CTD RNA_pol_A_bac RNA_pol_L_2 HHH_5 Cadherin_pro DUF6549
Other DBs
NCBI-ProteinID: AEC46346
Position
826192..827193
AA seq 333 aa
MKKSAKVYYIENKAEHLSDFETTFELQPLERGFANTLGNSLRRTILSSVPSVAVFGVKIE
GVEHEFSVIDKVREDVVTILNNLKKLRFSFKKEVFLQNEIQVASFDGRKVGKITGADILV
NSALEIVNKDQVVANTSEVGALKFEMFLTYGRGFVDFETNKRKIQELGPALESKLGYGQI
IAVDSDFSAVENVKFSSTELNSSNPIVEEKLTFSVKTDGTILAKDALAEAAKILIAHLKL
VSDTANLDAEVDSFFEEVKQKEEAPKKNSADLTTLDLTVRSLNALRRAQYYKISDLLELT
LEELENIKNLGKKSVEEIVEKLKEHNLELKKGE
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgaaaaaaagtgcaaaagtgtactacattgaaaataaagctgaacatctttctgatttt
gaaacaacatttgaattacaacctcttgaacgtggttttgctaacacattaggaaattcg
ctaagaagaacaattctatcatctgttccttcagtagcggtttttggtgttaaaattgag
ggtgtagaacacgaattttcagtaatagataaagttcgtgaagatgttgttacaatttta
aataatcttaaaaaattacgttttagcttcaaaaaagaagtatttttacaaaatgaaatt
caagtagcttcctttgatggaagaaaagttggaaaaattacaggagctgatattttagta
aattcagcacttgaaattgttaacaaagaccaagtcgttgcaaatacttccgaagttgga
gctttaaaatttgaaatgtttttaacttatggtcgtggttttgttgattttgaaacaaat
aaaagaaaaattcaagaacttggtcctgcattagaatctaaattaggttatggtcaaata
atcgctgttgattctgacttttcagctgttgaaaatgttaaattttcatctactgaatta
aactcttcaaatccaattgttgaagaaaaactaactttttcagttaaaactgatggaaca
attttagccaaagatgcacttgctgaagctgctaaaattttaattgcacatttaaaatta
gttagtgatacagcaaatttagatgctgaagttgattcattttttgaagaagtaaaacaa
aaagaagaagcaccgaagaaaaactcagcagatttaactacattggatctcacagttaga
tcattaaacgcgcttcgtagagcacaatattataaaatttctgatttattagaacttacc
ttagaagaacttgaaaacattaaaaatttaggtaaaaaatcagtagaagaaatagttgaa
aaattaaaagaacataatttagaacttaaaaaaggagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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