KEGG   Mesomycoplasma hyorhinis SK76: MOS_501
Entry
MOS_501           CDS       T02351                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mhs  Mesomycoplasma hyorhinis SK76
Pathway
mhs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOS_501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhs03019]
    MOS_501
Messenger RNA biogenesis [BR:mhs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MOS_501
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 PDEase_II
Other DBs
NCBI-ProteinID: AFX74416
Position
complement(548404..550179)
AA seq 591 aa
MSINYNEDTKDKNSKIIPTKFFGLGGMQEIGKSTLVIEHASDIVIIDSGVKFADIFTTGV
KGMIPDYSYLQKNQNKIKGLFITHGHEDHIGGIVYLIQQVHIKTIFAPRIAIQYLRARMD
EFGLKIKIKFIEIEKDAVHTFDHLSVDFWTAQHSIPDAFGIRVSSKNGSLMLTGDFRFDY
TPIGNYTDFSKLKQIGNENLTALFSDSTNAMRPSHSPSEKDILKDIEYHIKNATKKVIIT
AFASNLTRIKAIIDLGIKLDKKIVTFGRSMINGVKIGRKIGYINSPDNIFIDKKNISKYD
PNEILILTTGSQGEQLAALDKMSYNKHPHVKIGNKDVIIFSSSPIPGNRIKIELLINRLY
KLNAIIKENGSDGYLHTSGHAYKEEHEKIFELTKPKYFFPYHGEYRMCLAHKQTAIESGI
KATNVIIPDLGEVYEMVNQKITKSKEVIPTGPVYIDGYVVSTANSQILKEREELRENGFV
FILTAIDKKTNSIIGRSKVISRGAFFAKSSKNLLNEIRRLVHGAILFTIKNESKWDIPQL
KQLIKNRLTTFFYKEKRRKPVILSSFLFVDEKYDFLQDYAKTLSFEINDKS
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgagtattaactacaatgaggatacaaaggataaaaattcgaaaattattcctactaag
ttttttggtcttggaggaatgcaagaaatcggaaaatcgactttagtaattgaacacgct
tcagatattgtaataatagattcaggggttaaatttgcagatatttttaccacaggagtt
aaaggaatgattcctgattattcttatttgcaaaagaatcaaaacaaaattaaaggttta
tttataactcatggacacgaagatcatattggtggaattgtttatttaattcaacaagtg
catattaaaactatttttgcaccaagaatagcgattcagtatttaagagcaagaatggat
gaatttggtttgaaaattaagatcaaatttattgaaattgaaaaagatgcagtacatact
tttgatcatttaagtgtagatttttgaactgcgcaacattctattcctgatgcttttgga
attagagttagttcaaaaaacggttcacttatgttaacaggagattttaggtttgattac
acaccaattggaaattacactgatttttcaaaattaaaacaaattggtaatgaaaattta
actgctctgttttcagattcaacaaacgctatgagaccaagtcattccccaagtgaaaaa
gacattttaaaagacattgagtatcatattaaaaatgcaactaaaaaagtaattattact
gcttttgcttctaatttaacaagaattaaagcaattattgatctaggaataaagctagat
aaaaaaattgttacttttggaagaagtatgattaatggggtaaaaataggtagaaaaatt
ggttatattaactcaccagataacatttttattgataagaaaaacataagtaaatatgat
ccaaatgaaattttaattttaacaacaggttctcaaggagaacaattagctgctttagac
aaaatgtcatataacaaacatcctcacgttaaaattggcaataaagacgtgattattttt
tcttcatctcccattcctggcaatagaatcaaaattgaattattaattaatagattatat
aaattaaatgcaattattaaagaaaatggatcagatggttatctgcatacttcaggtcat
gcttataaagaagaacatgaaaaaatctttgagttgacaaaacctaaatattttttccct
tatcatggcgaatatcgaatgtgtttagcgcacaaacaaacagctatagaatcaggaatt
aaagcaacaaatgtaattattcctgatttgggtgaagtttatgaaatggttaatcaaaaa
attaccaaatcaaaagaagtaattccaacaggacctgtttacattgatggttatgttgtt
tccacagcaaattcacagattttaaaagaaagagaagaactaagagaaaatggttttgtt
tttatactaactgcaatagataaaaaaaccaattcaattattggaagatcaaaagtaatt
tctcgtggtgctttttttgccaaaagttcaaaaaatcttttaaatgaaataagaagatta
gtgcacggagcaattttatttacaattaaaaatgaatccaaatgagatattccacagcta
aaacaactaattaaaaatagattaactaccttcttttataaagaaaaaagaagaaaacca
gtgattctatcttcgtttttatttgtagatgaaaaatatgattttctacaagattatgca
aaaacattgtcttttgaaataaatgataaaagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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