KEGG   Mannheimia haemolytica USDA-ARS-SAM-185: D648_5040Help
Entry
D648_5040         CDS       T02522                                 

Definition
DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
mht  Mannheimia haemolytica USDA-ARS-SAM-185
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mht00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    D648_5040
   03420 Nucleotide excision repair
    D648_5040
   03430 Mismatch repair
    D648_5040
   03450 Non-homologous end-joining
    D648_5040
Enzymes [BR:mht01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     D648_5040
DNA repair and recombination proteins [BR:mht03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      D648_5040
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(506346..507170)
Genome map
AA seq 274 aa AA seqDB search
MKKLLLFLLFIGNPIFAKSPELMLVEQYQDQDISGWVMSEKLDGVRGFWDGQQLISRQGY
PLNPPDYFIQDFPPFAIDGELFSERGKFEEISSIVRSAQPKGWHKLKLQVFDVPNAQGNL
IERLATLENYLKQHPTLHIAIIEQIPIKDKAHLQQFYQSVLEQGGEGVIVRNPNAGYIQG
RSAQILKIKPVLDEECTVVAHHKGKGKYTDKLGAITCENQRGRFRIGSGFKDKERENPPP
IGSIITYKYRGVTESGKPRFATFWRIRNDQISEN
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgaaaaaactgctcttattcctactcttcattggtaaccctatttttgccaaatcgccc
gagttaatgctcgttgagcaatatcaagatcaagacatcagtggctgggtaatgtcagaa
aaactcgatggcgtgcgaggcttttgggacggtcaacagctcatcagccgccaaggttat
ccgctcaatccacccgactattttattcaagatttccctccttttgcgattgacggcgaa
ctgtttagcgaacggggcaaatttgaggaaatttcaagcattgtgcgttccgctcagccc
aaaggttggcacaagctgaaattacaggtgttcgatgtgccaaatgcacaagggaatttg
attgaacggctggcgaccttagagaattatctgaagcaacatccaacgctccatatcgct
attattgagcaaattccgattaaagataaagcccaccttcaacaattttaccaatctgtg
ctggaacaaggtggcgaaggggttatcgttcgcaacccgaatgcaggctatattcaaggt
cgttctgcccaaattttgaaaatcaaaccggttttagatgaggaatgcactgtggttgcc
catcataaaggcaaagggaaatataccgataaactcggggcaatcacttgtgaaaatcaa
cgtggacgttttcggattggcagcggttttaaagataaagaacgagaaaatccgccaccg
attggctcaatcattacctataaatatcgaggtgtcacagaatcaggcaagcccagattt
gcaacgttttggcgaataagaaatgatcaaatttctgaaaattaa

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