KEGG T02158: OCU

Mycobacterium intracellulare ATCC 13950: OCU_03260

Entry

OCU_03260 CDS T02158

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mia Mycobacterium intracellulare ATCC 13950

Pathway

mia03410	Base excision repair
mia03420	Nucleotide excision repair
mia03430	Mismatch repair
mia03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mia03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mia03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mia03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mia03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

379745046

NCBI-GeneID:

11907040

UniProt:

H8ILS4

Position

complement(330085..331140)

AA seq 351 aa
MPPVSPMLAKSVRAIPPHASYEPKWDGFRSICFRDGDDVELGSRNERPMTRYFPELVAAV
RAELPERCVIDGEIVIATDHGLDFEALQQRIHPADSRVRMLAEATPASFIAFDLLALAGD
DYTRRPFSERRAALVDAVGGSGRSIHVTPATTDLGTAQRWFDEFEGAGLDGVIAKPLDVT
YQPDKRVMFKIKHERTADCVVAGYRVHKSGADAIGSLLLGLYQDDGQLASVGVIGAFPMT
ERRRLFAELQPLVTDFADHPWNWAAHEAGERTPRKNEYSRWNAGKDLSFVPLRPERVVEV
RYDHMEGRRFRHTAQFNRWRPDRDPRSCTYEQLEQPVTFSLGEIVPGLGPG

NT seq 1056 nt +upstreamnt +downstreamnt
atgccgccggtgtcgccgatgctggccaagtcggttcgcgctatcccgccccacgcgtcg
tacgagcccaagtgggacggattcaggtcgatctgtttccgcgacggcgacgacgtcgag
ctcggcagccgcaacgagcggccgatgacccgctactttccggagttggtcgccgcggtc
agggccgagctgccggagcgctgcgtgatcgacggggagatcgtcatcgccaccgaccac
ggcctggacttcgaggcgctgcagcaacgcattcatccggccgactcgcgggtgcggatg
ctcgccgaggcgacgcccgcgtccttcatcgcgttcgacctgctggcgctcgccggcgac
gactacacccggcggccgttcagcgagcggcgggcggccctcgtcgatgcggtgggcgga
tcgggtcgctcgatccatgtcacgcccgcgacgaccgatctgggcaccgcgcagcgatgg
ttcgacgagttcgagggtgccggcctcgatggcgtgatcgccaagcccctggacgtcacc
taccagccggacaagcgggtgatgttcaagatcaagcacgaacggaccgcggactgtgtg
gtcgccggctatcgggtccacaagtccggcgccgacgcgatcgggtcgctgctgctgggg
ctctaccaggatgacgggcagctggcctcggtcggcgtcatcggcgcgttcccgatgacc
gagcgacgccggctgttcgccgaactgcagccgctcgtcaccgacttcgcggaccatccg
tggaactgggccgcccacgaggccggcgagcggacgccccgcaagaacgaatactcgcga
tggaacgccggcaaggacctctcgttcgtgccgctgcggcccgagcgcgtggtcgaggtc
cgctacgaccacatggagggtcggcggtttcgccataccgcgcagttcaatcggtggcgt
ccggaccgcgacccgcgctcgtgcacctacgaacagctggaacagccggtgacgttcagc
ctcggcgagatcgtgccgggcctcggcccgggctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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