KEGG   Mycobacterium intracellulare ATCC 13950: OCU_09380Help
Entry
OCU_09380         CDS       T02158                                 

Definition
(GenBank) hypothetical protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mia  Mycobacterium intracellulare ATCC 13950
Pathway
mia03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mia00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    OCU_09380
Enzymes [BR:mia01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     OCU_09380
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     OCU_09380
DNA repair and recombination proteins [BR:mia03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     OCU_09380
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Ribosomal_S13 zf-TFIIB FbpA Maf_N
Motif
Other DBs
NCBI-ProteinID: AFC42158
UniProt: H8ISW1
Position
923322..924185
Genome map
AA seq 287 aa AA seqDB search
MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPISALHGQTVVGADRWGKYLG
LRTDDLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVSDPQQIPQIASLGPDALDLGPDDLARVLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSEKQLAALHDAMTTVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactgcccgagatcgaagcgctggccgaccatctacggcgcaacgccgtgggc
ctgacggtcggccgcgtcgacatcgccgccctgtccgtcctgaagaccttcgacccgccg
atcagcgcgctgcacggccagaccgtggtcggggccgaccgctggggcaaatacctgggg
ctgcggacggacgacctttacctggtcgcccacttgtcccgggcgggctggttgcggtgg
tccgacaagctggccgcggcgccgctgcgccccggcaagggcccgatcgcgctgcgcgtg
cacctgggcacgcccggtgaggcgcccggcttcgacctcaccgaggccggcacccagaag
cggctggcggtgtggctggtaagcgacccgcagcagatcccacagatcgcctcgctcggg
ccggacgcgctggacctcggccccgacgacctggcccgcgttctggcgggcaacaccggg
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gacgagatcttgcacgtcgcgaagatctcgccgttcgccaccgccggcaagctgtccgag
aagcagctcgccgcattgcacgacgccatgaccaccgtgctcaccgacgcggtgagccgc
tccgtcggccagggcgctgccacgctcaagggtgagaagcgctccggattgcgcgtgcac
gcccgcacgggactgccctgcccggtgtgcggggacaccgtgcgcgaagtgtcattcgcg
gacaagtcttttcaatattgtccgacgtgtcagaccggaggcaaggtcctggccgaccgg
cggatgtcgcgtttgctgaagtag

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