KEGG   Allocoleopsis franciscana: Mic7113_4918
Entry
Mic7113_4918      CDS       T02374                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mic  Allocoleopsis franciscana
Brite
KEGG Orthology (KO) [BR:mic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mic03016]
    Mic7113_4918
Enzymes [BR:mic01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Mic7113_4918
Transfer RNA biogenesis [BR:mic03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Mic7113_4918
SSDB
Motif
Pfam: DNA_pol_A_exo1 Sipho_Gp157
Other DBs
NCBI-ProteinID: AFZ20580
UniProt: K9WJM2
Position
5754502..5755440
AA seq 312 aa
MPYFTKSHEIKSRISEYAQAEILWIDTEVADYKTDSPRLSLIQVLEHSTPLSGDNQALLT
MAEQVSVFDVLEQPSLVAEFIEQIMLNSAIEKVFHNASYDLKLLGKSKVKNVTCTFEMAK
KIPYYLLPVPNHKLKTLADQLCPLPPLDKTEQGSDWGRRPLSANQLYYAKMDAVYVAQVH
HQLLQIREPEPATEDIEALTMRYRQIEHRWKQLDTEMSQLKERLKAAMDAQKVKEIKGFK
LTNQKRTTKKVPFSPLAKMTQEMGIELDLSVTLTKQLQKELGDAIAQLPVEEETTDILQL
KVTEQDEEELPF
NT seq 939 nt   +upstreamnt  +downstreamnt
atgccatattttacaaaatctcacgaaattaagagcagaatttccgaatatgctcaggct
gaaattctttggatcgatacagaagtcgctgactataaaaccgattctcccagactatct
ttaattcaagttttagagcattcgactcctctgagtggcgataatcaagcgctgctgaca
atggcagaacaagtctcagtcttcgatgttttagaacagccgtcacttgtcgctgaattc
atcgagcaaattatgcttaattctgccatagaaaaggtttttcataatgctagctatgac
cttaaattgttgggaaaaagcaaggttaaaaatgtcacctgtacttttgaaatggcgaaa
aaaattccttactaccttctcccggtgcctaatcacaaactcaaaaccttagccgatcaa
ctgtgccctctacccccattggacaagactgaacaagggagtgattgggggcggcgtccc
ctcagtgcgaaccaactttattatgccaaaatggacgctgtttatgtggctcaagtacac
catcaattgttgcaaatccgtgaacctgaacctgccacagaagatatcgaagcactgacg
atgaggtatcgccaaatagagcatcgatggaagcagttggatactgaaatgagccaactt
aaagaacgtcttaaagcagcgatggatgcacaaaaagttaaagaaatcaagggttttaag
ttaacaaatcaaaagcgaaccaccaaaaaagttccctttagccccttggcaaaaatgacg
caagagatggggattgagttggatttatcggtcacgctgaccaagcaacttcagaaggaa
ttaggagatgcgatcgcacaactgccagtagaagaagaaaccacggatattttgcagttg
aaagttacagaacaggacgaagaagaattgccgttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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