KEGG T02325: MIP

Mycobacterium indicus pranii: MIP_00682

Entry

MIP_00682 CDS T02325

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mid Mycobacterium indicus pranii

Pathway

mid03410	Base excision repair
mid03420	Nucleotide excision repair
mid03430	Mismatch repair
mid03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mid03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mid03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mid03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mid03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

406028662

NCBI-GeneID:

13657943

UniProt:

J9W630

Position

complement(504484..505539)

AA seq 351 aa
MPPVSPMLAKSVRAIPPHASYEPKWDGFRSICFRDGDDVELGSRNERPMTRYFPELVAAV
RAELPERCVIDGEIVIATDHGLDFEALQQRIHPADSRVRMLAEATPASFIAFDLLALGGD
DYTRRPFSERRAALVDAVGGSGRSIHVTPATTDLGTAQRWFDEFEGAGLDGVIAKPLDVT
YQPDKRVMFKIKHERTADCVVAGYRVHKSGADAIGSLLLGLYQDDGQLASVGVIGAFPMA
ERRRLFAELQPLVTDFADHPWNWAAHEAGERTPRKNEYSRWNAGKDLSFVPLRPERVVEV
RYDHMEGRRFRHTAQFNRWRPDRDPRSCTYEQLEQPVTFSLGEIVPGLGPG

NT seq 1056 nt +upstreamnt +downstreamnt
atgccgccggtgtcgccgatgctggccaagtcggttcgcgctatcccgccccacgcgtcg
tacgagcccaagtgggacggattcaggtcgatctgtttccgcgacggcgacgacgtcgag
ctgggcagccgcaacgagcggccgatgacccgctactttccggagttggtcgccgcggtc
agggccgagctgccggagcgctgcgtgatcgacggggagatcgtcatcgccaccgaccac
ggcctggacttcgaggcgctgcagcaacgcattcacccggccgactcgcgggtgcggatg
ctcgccgaggcgacgcccgcgtccttcatcgcgttcgacctgctggcgctcggcggcgac
gactacacccggcggccgttcagcgagcggcgggcggccctggtcgatgcggtgggcgga
tcgggtcgctcgatccatgtcacgcccgcgacgaccgatctgggcaccgcgcagcgatgg
ttcgacgagttcgagggcgccggcctcgatggcgtgatcgccaagcccctggacgtcacc
taccagccggacaagcgggtgatgttcaagatcaagcacgaacggaccgcggactgtgtg
gtcgccggctatcgggtccacaagtccggcgccgacgcgatcgggtcgctgctgctgggg
ctctaccaggacgacgggcagctggcctcggtcggcgtcatcggcgccttcccgatggcc
gagcggcgccgcctgttcgccgaactgcagccgctcgtcaccgacttcgcggaccatccg
tggaactgggccgcccacgaggccggcgagcgaacgccccgcaaaaacgaatactcgcgg
tggaacgccggcaaggacctctcgttcgtgccgctgcggcccgagcgcgtggtcgaggtc
cgctacgaccacatggagggtcggcgctttcgtcataccgcgcagttcaatcggtggcgt
ccggaccgcgacccgcgctcgtgcacctacgaacagctggaacagccggtgacgttcagc
ctcggcgagatcgtgccgggcctcggcccgggctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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