KEGG   Mycobacterium intracellulare subsp. intracellulare: MIP_04535
Entry
MIP_04535         CDS       T02325                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
mid  Mycobacterium intracellulare subsp. intracellulare
Pathway
mid03030  DNA replication
mid03430  Mismatch repair
mid03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MIP_04535
   03430 Mismatch repair
    MIP_04535
   03440 Homologous recombination
    MIP_04535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mid03032]
    MIP_04535
   03400 DNA repair and recombination proteins [BR:mid03400]
    MIP_04535
Enzymes [BR:mid01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MIP_04535
DNA replication proteins [BR:mid03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MIP_04535
DNA repair and recombination proteins [BR:mid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MIP_04535
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: AFS15084
UniProt: J9WCX6
Position
complement(3354675..3358208)
AA seq 1177 aa
MNHSSFVHLHNHTEYSMLDGAAKIAPMLAEVDRLQMPAVGMTDHGNMFGASEFYNAATKA
GIKPIIGVEAYIAPASRFDTRRILWGDPGQKSDDVSGSGSYTHMTMVAETPTGLRNLFKL
SSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE
IFGADNYFLELMDHGLSIEQRVRDGLLEIGRKLGIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAAEMRRIWDDEVPGACDSTLLIAERVQPYDEVWAPRD
RMPIFPVPEGHDQASWLHHEVMAGLARRFPSGVGQDYIDRAEYEIKVICDKGFPSYFLIV
ADLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPPIMAKDIPLSGITDPAHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNI
KANRGIDLDLESVPLDDGPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESLVNFASVGTDIRFGLGAVRNVGANVVGSLIGTRNGKGKFTDFSDYLNKIDIAACNKKV
TESLIKAGAFDSLGHARKGLFLVHTDAVDSVLGTKKAEAIGQFDLFGGDDGCTEAVFTIK
VPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDTVVLINAKVAIR
DDRISLIANELVVPDFSSAQVNRPIAVSLPTRQCTIDKVSALKQVLARHPGTSQVHLRLI
SGDRITTLELDASLRVTPSPALMGDLKELLGPGCLGG
NT seq 3534 nt   +upstreamnt  +downstreamnt
atgaaccactcgtccttcgtgcacctgcataaccacaccgagtactcgatgttggacggt
gccgcgaagatcgcgccgatgctcgccgaggtggaccggctgcaaatgcccgcggtcggg
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacgcggcgaccaaggcc
gggatcaagccgatcatcggcgtcgaggcctacatcgcgcccgcgtcgcggttcgacacc
cggcggatcctgtggggtgaccccggccagaagtccgacgacgtctcgggcagcggctcc
tacacgcacatgacgatggtggccgagacgcccaccggcctgcgcaacctgttcaagctg
tcctcgctggcgtcgttcgagggccagctcggcaagtggtcgcggatggacgccgagatc
atcgccgaacacgccgagggcatcatcgccaccaccggctgcccctcgggggaggtgcag
acccggctgcgcctcggtcacgaccgcgaggcgctggagtcggcggccaagtggcgcgag
atcttcggcgccgacaactacttcctcgagctaatggaccacgggctgtccatcgagcag
cgggtccgcgacgggctgctcgagatcggccgcaagctgggcattccgccgctggccacc
aacgactgccactacgtcactcgcgacgccgcccacaaccacgaggcgctgctgtgcgtg
cagaccggcaagacgctctcggaccccaaccggttcaagttcgacggcgacggctactac
ctgaagtcggccgccgagatgcgccgcatctgggacgacgaggtccccggtgcttgcgac
tccaccctgttgatcgccgagcgggtgcagccctacgacgaggtctgggcgccgcgcgac
cggatgccgatcttcccggtgcccgaggggcacgaccaggcgagctggctgcaccacgag
gtgatggcggggctggcgcgccgcttcccgtccggcgtcggccaggactacatcgaccgg
gccgagtacgagatcaaggtcatctgcgacaagggtttcccgtcgtacttcctgatcgtc
gccgacctgatcaactacgcccggtcggtcgacatccgggtggggccggggcgcggttcg
gcggcgggctcgctggtggcctacgcgctgggcatcaccaacatcgatcccattccgcac
ggcctgctgttcgagcggttcctcaacccggaacgcccgtcggcgcccgacatcgacatc
gacttcgacgaccgccgtcgcggcgaaatggtgcgctacgccgccgacaagtggggctcc
gaccgcgtcgcccaggtcatcaccttcggcaccatcaaaaccaaagcggccctgaaggac
tcggcacgcatccactacggccagcccggcttcgccatcgccgaccggatcaccaaggcg
ctgccgccgccgatcatggccaaggacatcccgctgtcggggatcaccgatcccgcccac
gagcggtacaaggaggccgccgaggtccgcggccttatcgaaaccgaccctgacgtccgc
accatctaccagaccgcccgcggcctggaaggcctgatccgcaacgccggggtgcacgcg
tgcgcggtgatcatgagcagcgagccgctgaccgaggccattccgctgtggaagcggccg
caggacggcgccatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctg
aagatggacttcctgggcctgcgcaacctcacgatcatcggcgacgccctggataacatc
aaggccaacaggggaattgacctcgacctggaatccgtcccgctggacgacggacccacc
tacgagctgctgggccgcggcgacaccctgggcgtgttccagctcgacggcgggccgatg
cgcgatctgctgcgccgcatgcagcccaccgagttcaacgacatcgtcgcggtgctggcg
ctgtaccgccccggcccgatggggatgaacgcccacaacgactacgccgaccgcaagaac
ggccgccagccgatcaagccgattcacccggagctcgaggagccgctgcgcgagatcctc
tccgagacttacggtttgatcgtctaccaagagcagatcatgttcatcgcccagaaggtc
gcctcctacaccatgggcaaggccgacgcgctgcgcaaggccatgggcaagaaaaagctc
gaggtgctcgaggccgagtacaagggcttctacgagggcatgaccgccaacggcttctcc
gaaaaagcggtgaaggcgttgtgggacaccatccttccgttcgccgggtacgcgttcaac
aaatcacacgcggccggctatggcctggtctcgtactggaccgcctacctgaaggccaac
tatccggccgagtacatggccgggctgctgacctcggtgggtgacgacaaggacaaggcc
gccgtctacctggccgactgccgcaagctgggcatcacggtgttgccgcccgacgtcaac
gaatcgctggtgaacttcgcctcggtcggaacggacatccgtttcgggctgggtgcggtg
cgcaacgtcggcgccaacgtggtgggttcgctgatcggcacccgcaacggcaagggcaag
ttcaccgacttctcggactacctgaacaagatcgacatcgccgcctgcaacaagaaggtc
accgagtcgctgatcaaggccggcgcgttcgactcgctcggtcacgcccgcaagggcttg
ttcctggtgcacaccgacgctgtcgattcggtgctgggcaccaagaaggccgaggcgatc
ggccagttcgacctgttcggcggcgacgacgggtgcaccgaagcggtgttcaccatcaag
gtgcccgacgacgagtgggaggacaagcacaagctcgcgctggagcgagagatgctgggc
ctctacgtgtccgggcatccgctcaacggggtggcgcacctgctggccgcgcaggtggac
acccagatcccggccatcctcgacggcgacgtgcccaacgagacccaggtgcgcgtcggc
ggcatcctcgcgtcggtcaaccggcgggtcaacaagaacgggatgccttgggcgtcagcg
caattggaggacctcaccggtggcatcgaggtgatgttcttcccgcacgcgtattccacc
tacggcgccgacatcgccgatgacaccgtcgtgctgatcaacgccaaggtggccatccgc
gacgatcggatcagcctgatcgccaacgagcttgtggtgccggacttttccagcgcccag
gtgaatcggccgatcgccgtcagcctgccgacgcggcagtgcaccatcgacaaggtcagc
gcgctcaagcaggtgctggcccggcacccggggacctcgcaggtgcatctgcggctgatc
agcggggaccggatcaccacgctggaactcgatgcgtcgcttcgggtgacgccgtcgccg
gcgttgatgggtgacctcaaggagctgctcggcccgggctgcctgggcggctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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