KEGG T01234: Metin

Methanocaldococcus infernus: Metin_0801

Entry

Metin_0801 CDS T01234

Definition

DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mif Methanocaldococcus infernus

Pathway

mif03030	DNA replication
mif03410	Base excision repair
mif03420	Nucleotide excision repair
mif03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mif03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mif03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mif03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mif03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DNA_ligase_OB_2 DUF3361 DUF4368

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(719991..721688)

AA seq 565 aa
MLWKEVCEIFNKIENTTKRLDKRAYFIKLLEKVKDPEDLKRICYIAIGRVFPEYDERELG
VGEKLLINAIISSGINKDKLYEKIKETGDIGLAAEKAKEEGKVKTLLFSPLTVKEVFETL
RKVAETEGEGSQKKKMRLISSLFLRASPIERRYLARLILGDMRIGMNIPTVLEALSIYFN
VPKEKLEKIYAVTNDIGLLAEKLMKNELDDKELNIKLFRPIKPMLAQLAPSIEEAIIEMG
HPQFETKYDGARIQIHKKGDKVKIYSRKLEDVTHALPEIVNEIKKFKHDLIVEGECVAIE
EGRPRPFQDILRRFRRKHDIGKAMKKINLRAYLFDLLYKDGESYIDKPFKERRKALEELV
GYENDWRKERERIERELKEDKKIDISYKLVTNDPREAKEFYKWSLSIGHEGVMIKNLNAP
YTPGSRVRTMYKFKPTLENLDVVITKAKRGMGKRKDWYGSFEICVKDKDGNLQPIGYVGT
GLTEEDLQMLKEMIDKIVVKDLGDEVIVKPEIVVEVAYEEIQKSDKYPCGYALRFPRIVR
FRFDKSIEDINTLEDVERIYKLQRK

NT seq 1698 nt +upstreamnt +downstreamnt
atgttgtggaaagaagtttgtgaaatttttaacaagatagagaatacaactaagaggtta
gataagagagcttactttataaaattgcttgagaaggttaaagatcctgaggatttaaaa
agaatttgctatatagccataggaagagttttcccagagtatgatgagagagagcttggt
gttggggagaagttattgattaatgctatcatctcctcaggaattaataaggataagctc
tatgagaagattaaagagactggagatattggcttagctgctgagaaggctaaggaagaa
gggaaggttaaaactcttctcttctctccactgacagttaaggaggtttttgagacatta
aggaaggttgctgagactgaaggagagggtagccagaaaaagaagatgaggcttatatca
agcctatttttaagagcaagcccaatagagaggagatacttagcaaggcttattttagga
gacatgaggataggaatgaacattcccacagttttagaagctctttccatttatttcaat
gtccctaaagagaagttagaaaaaatttatgctgtaactaatgacattggtttattggct
gagaagttaatgaagaatgagcttgatgataaagaacttaacattaagttatttagacca
ataaaacctatgcttgctcagctggctccttcaatagaggaagctattatagagatggga
catcctcagtttgaaaccaagtatgatggagcaaggatccagatacataagaagggagat
aaggttaaaatttacagtagaaagttggaagatgttacccatgccttgccagagattgtt
aatgagataaagaagtttaaacatgacttaattgttgaaggtgagtgtgtagccatagag
gaaggaagaccaaggccttttcaagacatactaaggagatttagaaggaaacatgatatt
ggaaaggctatgaaaaagattaacttaagggcttatctatttgacttactatataaggat
ggagaatcttacatagataaaccttttaaagagagaaggaaagctttagaagagcttgta
ggatatgagaatgattggaggaaagagagggagaggatagagagggaattaaaggaggat
aagaagatagatatctcttataagttggtaactaatgacccaagagaggctaaagagttt
tataagtggtctctatctataggacatgagggagttatgatcaaaaatttaaatgctcct
tacactccagggagtagagtaagaactatgtataaatttaaacctaccttagaaaactta
gatgttgtcataacaaaggctaagagaggaatgggaaagagaaaggattggtatggctct
tttgagatttgtgttaaagataaagatgggaatttacagcctataggttatgtgggaact
ggcttaactgaagaggatttacagatgcttaaggagatgattgataagatagttgttaaa
gaccttggagatgaggttatagttaagccagagattgttgttgaagtggcttatgaagag
attcagaaatctgataaatacccctgtggctatgctctcagatttccaagaattgttagg
tttaggtttgataagagtatagaggatataaatacacttgaagatgttgagagaatttac
aagcttcagagaaagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MIF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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